Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas simiae WCS417 | PS417_24190 | | AraC family transcriptional regulator | insig. | 100 | 100 |
o | Bacteroides stercoris CC31F | HMPREF1181_RS11865 | | AraC family transcriptional regulator | cofit | 31 | 95 |
o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00665 | | AraC family transcriptional regulator | insig. | 32 | 84 |
o | Bacteroides thetaiotaomicron VPI-5482 | BT1968 | | transcriptional regulator (NCBI ptt file) | sig. | 31 | 84 |
o | Bacteroides ovatus ATCC 8483 | BACOVA_01387 | | transcriptional regulator, AraC family | insig. | 29 | 96 |
| Bacteroides ovatus ATCC 8483 | BACOVA_04628 | | transcriptional regulator, AraC family | strong | 29 | 86 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00527 | | transcriptional regulator, AraC family | insig. | 31 | 85 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1235 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 30 | 85 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3974 | | conserved hypothetical protein (NCBI ptt file) | strong | 28 | 83 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03835 | | AraC family transcriptional regulator | insig. | 26 | 87 |
| Bacteroides stercoris CC31F | HMPREF1181_RS04015 | | AraC family transcriptional regulator | insig. | 28 | 83 |
o | Phocaeicola dorei CL03T12C01 | ABI39_RS21020 | | helix-turn-helix transcriptional regulator | insig. | 25 | 84 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07130 | | helix-turn-helix transcriptional regulator | insig. | 25 | 83 |
| Bacteroides stercoris CC31F | HMPREF1181_RS16105 | | helix-turn-helix domain-containing protein | cofit | 27 | 86 |
o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07260 | | helix-turn-helix transcriptional regulator | insig. | 24 | 83 |
| Bacteroides ovatus ATCC 8483 | BACOVA_02013 | | transcriptional regulator, AraC family | insig. | 25 | 85 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03705 | | AraC family transcriptional regulator | insig. | 28 | 85 |
o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13450 | | AraC family transcriptional regulator | insig. | 29 | 83 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS02045 | | AraC family transcriptional regulator | insig. | 27 | 81 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03710 | | AraC family transcriptional regulator | insig. | 25 | 85 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02740 | | AraC family transcriptional regulator | insig. | 27 | 81 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03728 | | transcriptional regulator, AraC family | insig. | 26 | 84 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS14000 | | helix-turn-helix domain-containing protein | cofit | 24 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS39060 | | helix-turn-helix domain-containing protein | insig. | 30 | 56 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0559 | | transcriptional regulator (NCBI ptt file) | insig. | 25 | 92 |
| Pseudomonas stutzeri RCH2 | Psest_2188 | | AraC-type DNA-binding domain-containing proteins | sig. | 34 | 39 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13585 | | hypothetical protein | insig. | 40 | 37 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS09650 | | AraC family transcriptional regulator | strong | 24 | 89 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS15720 | | helix-turn-helix transcriptional regulator | strong | 33 | 48 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00812 | | transcriptional regulator, AraC family | insig. | 33 | 44 |
| Paraburkholderia graminis OAS925 | ABIE53_001115 | | AraC family transcriptional activator of pobA | insig. | 35 | 36 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS16230 | | AraC family transcriptional regulator | insig. | 24 | 95 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS12115 | | AraC family transcriptional regulator | sig. | 24 | 98 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2939 | | putative transcriptional regulator (NCBI ptt file) | insig. | 25 | 89 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1404 | | putative transcriptional regulator (NCBI ptt file) | insig. | 27 | 62 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS07320 | | AraC family transcriptional regulator | strong | 26 | 85 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2792 | | regulator of the bile salt efflux system (from data) | strong | 23 | 85 |
| Cellulophaga baltica 18 | M666_RS13230 | | AraC family transcriptional regulator | insig. | 24 | 84 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15620 | | helix-turn-helix domain-containing protein | insig. | 27 | 85 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS21220 | | AraC family transcriptional regulator | insig. | 25 | 85 |
| Bacteroides stercoris CC31F | HMPREF1181_RS03690 | | helix-turn-helix domain-containing protein | insig. | 23 | 93 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF447 | | Transcriptional regulator, AraC family | insig. | 31 | 38 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS21715 | | AraC family transcriptional regulator | insig. | 26 | 88 |
| Bacteroides stercoris CC31F | HMPREF1181_RS16790 | | helix-turn-helix domain-containing protein | strong | 26 | 83 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_03675 | | hypothetical protein | sig. | 25 | 87 |
| Castellaniella sp019104865 MT123 | ABCV34_RS02740 | | helix-turn-helix domain-containing protein | insig. | 35 | 34 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_18840 | | AraC family transcriptional regulator | sig. | 37 | 33 |
| Pseudomonas aeruginosa PA14 | IKLFDK_24340 | | AraC family transcriptional regulator | insig. | 28 | 50 |
| Bacteroides ovatus ATCC 8483 | BACOVA_02872 | | transcriptional regulator, AraC family | insig. | 24 | 90 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS03240 | | AraC family transcriptional regulator | insig. | 25 | 83 |
| Pseudomonas putida KT2440 | PP_3538 | | transcriptional regulator | strong | 25 | 58 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00710 | | transcriptional regulator, AraC family | insig. | 31 | 40 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_10555 | | AraC family transcriptional regulator | insig. | 22 | 87 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1385 | | transcriptional regulator (NCBI ptt file) | sig. | 37 | 35 |
| Cellulophaga baltica 18 | M666_RS04065 | | helix-turn-helix domain-containing protein | insig. | 33 | 47 |
| Klebsiella michiganensis M5al | BWI76_RS03835 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 41 | 35 |
| Bacteroides ovatus ATCC 8483 | BACOVA_00165 | | transcriptional regulator, AraC family | insig. | 36 | 37 |
| Escherichia coli ECOR27 | NOLOHH_03750 | hpaA | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 42 | 35 |
| Escherichia coli ECRC62 | BNILDI_07850 | hpaA | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | cofit | 42 | 35 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03717 | | HTH-type transcriptional activator RhaR | insig. | 42 | 35 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04225 | | helix-turn-helix transcriptional regulator | sig. | 33 | 35 |
| Escherichia coli BL21 | ECD_04223 | | HpaA | insig. | 42 | 35 |
| Enterobacter asburiae PDN3 | EX28DRAFT_3540 | | 4-hydroxyphenylacetate catabolism regulatory protein HpaA | insig. | 40 | 38 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1090 | | AraC-type transcription regulator (NCBI ptt file) | sig. | 22 | 83 |
| Pseudomonas sp. BP01 | JOY50_RS21410 | | helix-turn-helix domain-containing protein | insig. | 31 | 38 |
| Enterobacter sp. TBS_079 | MPMX20_00635 | | HTH-type transcriptional activator RhaR | insig. | 39 | 35 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13170 | | helix-turn-helix domain-containing protein | insig. | 31 | 48 |
| Bacteroides ovatus ATCC 8483 | BACOVA_03237 | | transcriptional regulator, AraC family | insig. | 21 | 83 |
| Rhodopseudomonas palustris CGA009 | TX73_005185 | | helix-turn-helix domain-containing protein | sig. | 36 | 34 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS29055 | | AraC family transcriptional regulator | strong | 31 | 36 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03815 | | AraC family transcriptional regulator | insig. | 26 | 86 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2120 | | transcriptional regulator (NCBI ptt file) | insig. | 25 | 83 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS19510 | | helix-turn-helix domain-containing protein | insig. | 31 | 50 |
| Cellulophaga baltica 18 | M666_RS04530 | | AraC family transcriptional regulator | insig. | 33 | 39 |
| Pseudomonas sp. BP01 | JOY50_RS27470 | | helix-turn-helix domain-containing protein | insig. | 24 | 57 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2226 | | transcriptional regulator (NCBI ptt file) | insig. | 23 | 86 |
| Castellaniella sp019104865 MT123 | ABCV34_RS02730 | | helix-turn-helix domain-containing protein | insig. | 31 | 34 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3285 | | Transcriptional activator of 4-hydroxyphenylacetate 3-monooxygenase operon, XylS/AraC family | insig. | 40 | 35 |
| Cellulophaga baltica 18 | M666_RS14335 | | helix-turn-helix domain-containing protein | insig. | 22 | 86 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2924 | | AraC-type DNA-binding domain-containing proteins | insig. | 31 | 33 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS19910 | | AraC family transcriptional regulator | insig. | 32 | 36 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS13685 | | AraC family transcriptional regulator | insig. | 31 | 49 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1540 | | transcriptional regulator (NCBI ptt file) | sig. | 27 | 68 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3419 | | Transcriptional regulator PobR, AraC family | insig. | 31 | 34 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12365 | | AraC family transcriptional regulator | insig. | 31 | 40 |
| Cellulophaga baltica 18 | M666_RS17520 | | helix-turn-helix transcriptional regulator | insig. | 30 | 48 |
| Paraburkholderia graminis OAS925 | ABIE53_006323 | | AraC family transcriptional activator of pobA | insig. | 28 | 36 |
| Cellulophaga baltica 18 | M666_RS15995 | | helix-turn-helix transcriptional regulator | insig. | 23 | 85 |
| Pseudomonas syringae pv. syringae B728a | Psyr_3499 | | transcriptional regulator, AraC family | insig. | 35 | 29 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3499 | | transcriptional regulator, AraC family | insig. | 35 | 29 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01480 | | transcriptional regulator, effector binding domain protein | insig. | 35 | 34 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07105 | | helix-turn-helix domain-containing protein | insig. | 22 | 82 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS01545 | | helix-turn-helix domain-containing protein | cofit | 33 | 33 |
| Bacteroides thetaiotaomicron VPI-5482 | BT1904 | | transcriptional regulator, AraC-type (NCBI ptt file) | insig. | 33 | 34 |
| Bacteroides thetaiotaomicron VPI-5482 | BT0995 | | transcription regulator, AraC-type (NCBI ptt file) | insig. | 31 | 37 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS39670 | | helix-turn-helix domain-containing protein | insig. | 28 | 36 |
| Bacteroides ovatus ATCC 8483 | BACOVA_04049 | | transcriptional regulator, AraC family | insig. | 23 | 83 |
| Bacteroides stercoris CC31F | HMPREF1181_RS10625 | | AraC family transcriptional regulator | cofit | 31 | 37 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3534 | | AraC-type DNA-binding domain-containing proteins | insig. | 32 | 37 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS15390 | | AraC family transcriptional regulator | insig. | 30 | 42 |