Homologs of PS417_14905 from Pseudomonas simiae WCS417
C4-dicarboxylate ABC transporter
SEED: TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter
KEGG: C4-dicarboxylate transporter, DctQ subunit
26 hits from BLASTp (E < 0.01)
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Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Pseudomonas simiae WCS417 | PS417_14905 | | C4-dicarboxylate ABC transporter | insig. | 100 | 100 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS16925 | | TRAP transporter small permease | insig. | 98 | 100 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS16925 | | TRAP transporter small permease | strong | 98 | 100 |
o | Pseudomonas sp. RS175 | PFR28_00120 | | C4-dicarboxylate TRAP transporter small permease protein DctQ | insig. | 65 | 100 |
o | Pseudomonas sp. DMC3 | GFF1145 | | C4-dicarboxylate TRAP transporter small permease protein DctQ | insig. | 65 | 100 |
o | Pseudomonas aeruginosa PA14 | IKLFDK_27645 | | C4-dicarboxylate TRAP transporter small permease protein DctQ | insig. | 65 | 99 |
| Pseudomonas aeruginosa PA14 | IKLFDK_03930 | | C4-dicarboxylate ABC transporter | insig. | 62 | 98 |
o | Pseudomonas stutzeri RCH2 | Psest_4269 | | C4-dicarboxylate transporter, DctQ subunit (from data) | strong | 61 | 100 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS05055 | | TRAP transporter small permease | insig. | 33 | 94 |
o | Shewanella sp. ANA-3 | Shewana3_1415 | | tripartite ATP-independent periplasmic transporter DctQ (RefSeq) | strong | 28 | 99 |
o | Shewanella oneidensis MR-1 | SO3135 | | C4-dicarboxylate transporter, putative (NCBI ptt file) | insig. | 28 | 94 |
o | Shewanella amazonensis SB2B | Sama_2210 | | alpha-ketoglutarate TRAP transporter, small permease component (from data) | strong | 28 | 97 |
o | Shewanella loihica PV-4 | Shew_1445 | | dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) | cofit | 28 | 98 |
o | Vibrio cholerae E7946 ATCC 55056 | CSW01_09645 | | C4-dicarboxylate ABC transporter permease | insig. | 25 | 92 |
| Phaeobacter inhibens DSM 17395 | PGA1_c20670 | | TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) | strong | 29 | 60 |
o | Rhodopseudomonas palustris CGA009 | TX73_010555 | | TRAP transporter small permease | strong | 24 | 87 |
| Azospirillum brasilense Sp245 | AZOBR_RS09600 | | C4-dicarboxylate ABC transporter permease | sig. | 27 | 82 |
| Rhodospirillum rubrum S1H | Rru_A3677 | | Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) | strong | 27 | 82 |
o | Herbaspirillum seropedicae SmR1 | HSERO_RS04245 | | C4-dicarboxylate ABC transporter permease | insig. | 29 | 91 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04555 | | TRAP transporter small permease | cofit | 28 | 82 |
| Castellaniella sp019104865 MT123 | ABCV34_RS13975 | | TRAP transporter small permease | insig. | 26 | 97 |
| Dechlorosoma suillum PS | Dsui_3154 | | TRAP-type C4-dicarboxylate transport system, small permease component | sig. | 27 | 83 |
| Castellaniella sp019104865 MT123 | ABCV34_RS07850 | | TRAP transporter small permease | insig. | 26 | 80 |
| Azospirillum sp. SherDot2 | MPMX19_00660 | | C4-dicarboxylate TRAP transporter small permease protein DctQ | insig. | 31 | 48 |
| Sinorhizobium meliloti 1021 | SM_b20034 | | ABC transporter | insig. | 31 | 40 |
| Dinoroseobacter shibae DFL-12 | Dshi_1833 | | Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) | insig. | 21 | 60 |