Conservation of cofitness between Xcc-8004.1409.1 and Xcc-8004.5407.1 in Xanthomonas campestris pv. campestris strain 8004

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1409.1 Cation:proton antiporter 1.0 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.39 10
Lysobacter sp. OAE881 0.61 ABIE51_RS04995 YbaL family putative K(+) efflux transporter 0.64 ABIE51_RS00735 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.64 29
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS09815 sodium:proton antiporter 0.41 HSERO_RS21670 tRNA modification GTPase TrmE — —
Pectobacterium carotovorum WPP14 0.53 HER17_RS15675 Kef family K(+) transporter 0.43 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS05810 Kef family K(+) transporter 0.43 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Serratia liquefaciens MT49 0.52 IAI46_05280 Kef family K(+) transporter 0.44 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Rhizobium sp. OAE497 0.51 ABIE40_RS02845 YbaL family putative K(+) efflux transporter 0.30 ABIE40_RS19220 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 107
Escherichia coli ECRC62 0.51 BNILDI_22470 ybaL Kef family K(+) transporter 0.42 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli ECOR38 0.51 HEPCGN_06740 ybaL Kef family K(+) transporter 0.42 HEPCGN_13680 tRNA modification GTPase MnmE low > 87
Escherichia coli ECOR27 0.51 NOLOHH_01050 ybaL Kef family K(+) transporter 0.43 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli BW25113 0.51 b0478 ybaL predicted transporter with NAD(P)-binding Rossmann-fold domain (NCBI) 0.42 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Escherichia coli ECRC102 0.51 NIAGMN_06175 ybaL Kef family K(+) transporter 0.43 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03196 Putative cation/proton antiporter YbaL 0.43 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia coli ECRC100 0.51 OKFHMN_08120 ybaL Kef family K(+) transporter 0.43 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia coli BL21 0.51 ECD_00429 inner membrane putative NAD(P)-binding transporter 0.43 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase low > 61
Escherichia coli ECRC99 0.51 KEDOAH_19845 ybaL Kef family K(+) transporter 0.43 KEDOAH_13165 tRNA modification GTPase MnmE — —
Escherichia coli ECRC101 0.51 MCAODC_27345 ybaL Kef family K(+) transporter 0.43 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC98 0.51 JDDGAC_11770 ybaL Kef family K(+) transporter 0.43 JDDGAC_18605 tRNA modification GTPase MnmE — —
Rhodopseudomonas palustris CGA009 0.51 TX73_019900 YbaL family putative K(+) efflux transporter 0.27 TX73_001535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Sinorhizobium meliloti 1021 0.51 SMa1600 Potassium efflux protein 0.28 SMc02797 tRNA modification GTPase TrmE — —
Klebsiella michiganensis M5al 0.51 BWI76_RS06855 Kef family K(+) transporter 0.43 BWI76_RS00050 tRNA modification GTPase — —
Dickeya dianthicola ME23 0.51 DZA65_RS06185 Kef family K(+) transporter 0.44 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli Nissle 1917 0.51 ECOLIN_RS02835 YbaL family putative K(+) efflux transporter 0.43 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Rahnella sp. WP5 0.51 EX31_RS22550 Kef family K(+) transporter 0.43 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Dickeya dianthicola 67-19 0.50 HGI48_RS05860 Kef family K(+) transporter 0.43 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4397 POTASSIUM/PROTON ANTIPORTER ROSB 0.42 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Escherichia fergusonii Becca 0.50 EFB2_03580 Putative cation/proton antiporter YbaL 0.43 EFB2_04925 tRNA modification GTPase MnmE low > 86
Erwinia tracheiphila SCR3 0.50 LU632_RS18075 Kef family K(+) transporter 0.42 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Enterobacter sp. TBS_079 0.50 MPMX20_01079 Putative cation/proton antiporter YbaL 0.43 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2480 transporter, monovalent cation:proton antiporter-2 (CPA2) family 0.42 EX28DRAFT_3993 tRNA modification GTPase TrmE — —
Pantoea sp. MT58 0.49 IAI47_14430 Kef family K(+) transporter 0.42 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Bosea sp. OAE506 0.49 ABIE41_RS09065 YbaL family putative K(+) efflux transporter 0.27 ABIE41_RS04680 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 77
Rhodospirillum rubrum S1H 0.48 Rru_A3670 Potassium efflux system protein (NCBI) 0.28 Rru_A3624 tRNA modification GTPase TrmE (NCBI) — —
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS19930 YbaL family putative K(+) efflux transporter 0.46 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_4169 Kef-type K+ transport system, predicted NAD-binding component 0.21 Ga0059261_2204 tRNA modification GTPase trmE low > 68
Variovorax sp. SCN45 0.45 GFF823 Inner membrane protein YbaL, KefB/KefC family 0.38 GFF3275 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE — —
Variovorax sp. OAS795 0.44 ABID97_RS12470 YbaL family putative K(+) efflux transporter 0.40 ABID97_RS02655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4794 TrkA-N:Sodium/hydrogen exchanger 0.42 GFF2437 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Dechlorosoma suillum PS 0.42 Dsui_3298 Kef-type K+ transport system, predicted NAD-binding component 0.39 Dsui_0837 tRNA modification GTPase TrmE low > 51
Acidovorax sp. GW101-3H11 0.41 Ac3H11_382 TrkA-N:Sodium/hydrogen exchanger 0.39 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 79
Acinetobacter radioresistens SK82 0.37 MPMX26_00373 Putative cation/proton antiporter YbaL 0.46 MPMX26_03070 tRNA modification GTPase MnmE low > 36
Pseudomonas stutzeri RCH2 0.13 Psest_3506 Kef-type K+ transport system, predicted NAD-binding component 0.47 Psest_4373 tRNA modification GTPase TrmE — —

Not shown: 0 genomes with orthologs for Xcc-8004.1409.1 only; 58 genomes with orthologs for Xcc-8004.5407.1 only