Conservation of cofitness between Xcc-8004.1205.1 and Xcc-8004.2957.1 in Xanthomonas campestris pv. campestris strain 8004

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1205.1 hypothetical protein 1.0 Xcc-8004.2957.1 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.78 9
Lysobacter sp. OAE881 0.82 ABIE51_RS17260 RidA family protein 0.52 ABIE51_RS17520 bifunctional aspartate kinase/homoserine dehydrogenase I 0.87 44
Alteromonas macleodii MIT1002 0.58 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.33 MIT1002_03086 Aspartokinase I/homoserine dehydrogenase I low > 70
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_0573 endoribonuclease L-PSP, putative 0.18 B158DRAFT_2460 aspartate kinase (EC 2.7.2.4) low > 40
Shewanella amazonensis SB2B 0.57 Sama_0263 YjgF-like protein (RefSeq) 0.29 Sama_0905 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.72 5
Shewanella loihica PV-4 0.56 Shew_3500 putative endoribonuclease L-PSP (RefSeq) 0.31 Shew_1079 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.75 15
Shewanella oneidensis MR-1 0.56 SO0358 endoribonuclease L-PSP, putative (NCBI ptt file) 0.31 SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_3813 putative endoribonuclease L-PSP (RefSeq) 0.31 Shewana3_1139 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_12735 RidA family protein 0.31 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Dickeya dadantii 3937 0.51 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase 0.33 DDA3937_RS18415 bifunctional aspartate kinase/homoserine dehydrogenase I 0.37 43
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS14715 RidA family protein 0.30 ABI39_RS10430 bifunctional aspartate kinase/homoserine dehydrogenase I low > 72
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS18400 RidA family protein 0.31 HMPREF1058_RS14720 bifunctional aspartate kinase/homoserine dehydrogenase I 0.58 27
Dickeya dianthicola ME23 0.51 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase 0.33 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase 0.33 HGI48_RS18345 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase 0.33 ECOLIN_RS00010 bifunctional aspartate kinase/homoserine dehydrogenase I low > 55
Escherichia coli ECRC98 0.50 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 JDDGAC_14705 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 86
Escherichia coli ECRC102 0.50 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 NIAGMN_08960 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECOR27 0.50 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 NOLOHH_03440 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli BW25113 0.50 b4243 yjgF orf, hypothetical protein (VIMSS) 0.33 b0002 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) low > 76
Escherichia coli BL21 0.50 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification 0.33 ECD_00002 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 61
Escherichia coli ECRC101 0.50 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 MCAODC_01625 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Escherichia coli ECRC99 0.50 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 KEDOAH_17045 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia fergusonii Becca 0.50 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase 0.33 EFB2_04041 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 86
Escherichia coli ECRC62 0.50 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 BNILDI_08160 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli ECOR38 0.50 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 HEPCGN_09115 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Escherichia coli ECRC100 0.50 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 OKFHMN_11110 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase 0.33 OHPLBJKB_03658 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 73
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS22825 reactive intermediate/imine deaminase 0.34 CA265_RS23475 aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) 0.88 6
Klebsiella michiganensis M5al 0.49 BWI76_RS02985 reactive intermediate/imine deaminase 0.33 BWI76_RS04245 bifunctional aspartate kinase/homoserine dehydrogenase I 0.45 7
Pantoea sp. MT58 0.48 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.33 IAI47_16215 bifunctional aspartate kinase/homoserine dehydrogenase I 0.90 2
Rahnella sp. WP5 0.48 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase 0.34 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I 0.48 60
Enterobacter sp. TBS_079 0.47 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase 0.32 MPMX20_00710 Bifunctional aspartokinase/homoserine dehydrogenase 1 0.40 21
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF928 Endoribonuclease L-PSP 0.32 GFF1078 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) low > 78
Enterobacter asburiae PDN3 0.47 EX28DRAFT_3444 reactive intermediate/imine deaminase 0.32 EX28DRAFT_3614 aspartate kinase (EC 2.7.2.4) low > 76
Pectobacterium carotovorum WPP14 0.47 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase 0.33 HER17_RS02795 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Parabacteroides merdae CL09T00C40 0.46 HMPREF1078_RS02020 RidA family protein 0.29 HMPREF1078_RS10385 bifunctional aspartate kinase/homoserine dehydrogenase I low > 61
Bacteroides thetaiotaomicron VPI-5482 0.44 BT1336 putative translation initiation inhibitor (NCBI ptt file) 0.29 BT2403 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) 0.60 46
Erwinia tracheiphila SCR3 0.44 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase 0.33 LU632_RS02610 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Bacteroides ovatus ATCC 8483 0.44 BACOVA_00589 putative endoribonuclease L-PSP 0.29 BACOVA_03021 homoserine dehydrogenase 0.56 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS17245 RidA family protein 0.34 ABZR88_RS18950 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.43 Echvi_1327 endoribonuclease L-PSP, putative 0.36 Echvi_2000 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) low > 79
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS10885 RidA family protein 0.29 HMPREF1181_RS00060 bifunctional aspartate kinase/homoserine dehydrogenase I low > 56
Serratia liquefaciens MT49 0.42 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase 0.33 IAI46_03030 bifunctional aspartate kinase/homoserine dehydrogenase I low > 86

Not shown: 50 genomes with orthologs for Xcc-8004.1205.1 only; 0 genomes with orthologs for Xcc-8004.2957.1 only