Conservation of cofitness between SMc00770 and SMc00727 in Sinorhizobium meliloti 1021

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00770 putrescine-binding periplasmic protein 1.0 SMc00727 3-hydroxybutyryl-CoA dehydrogenase 0.43 5
Rhizobium sp. OAE497 0.77 ABIE40_RS03265 polyamine ABC transporter substrate-binding protein 0.89 ABIE40_RS17510 3-hydroxybutyryl-CoA dehydrogenase low > 107
Rhodopseudomonas palustris CGA009 0.61 TX73_010380 polyamine ABC transporter substrate-binding protein 0.74 TX73_024670 3-hydroxybutyryl-CoA dehydrogenase low > 86
Agrobacterium fabrum C58 0.61 Atu0609 ABC transporter, substrate binding protein (putrescine) 0.85 Atu3597 3-hydroxybutyryl-CoA dehydrogenase low > 89
Phaeobacter inhibens DSM 17395 0.55 PGA1_c34420 putrescine-binding periplasmic protein PotF 0.68 PGA1_c01220 putative 3-hydroxybutyryl-CoA dehydrogenase low > 62
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_929 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.48 PfGW456L13_3873 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) low > 87
Rahnella sp. WP5 0.54 EX31_RS09630 spermidine/putrescine ABC transporter substrate-binding protein PotF 0.25 EX31_RS16685 3-hydroxyacyl-CoA dehydrogenase family protein low > 89
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4514 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.49 Pf6N2E2_1722 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) low > 103
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2260 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.49 Pf1N1B4_5134 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) — —
Pseudomonas sp. RS175 0.53 PFR28_04294 Spermidine-binding periplasmic protein SpuE 0.47 PFR28_02062 3-hydroxybutyryl-CoA dehydrogenase low > 88
Bosea sp. OAE506 0.53 ABIE41_RS21650 polyamine ABC transporter substrate-binding protein 0.77 ABIE41_RS07130 3-hydroxybutyryl-CoA dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_13160 putrescine ABC transporter, substrate-binding component (from data) 0.46 AO356_29995 3-hydroxybutyryl-CoA dehydrogenase low > 104
Pseudomonas putida KT2440 0.53 PP_5180 spermidine/putrescine ABC transporter - periplasmic subunit 0.50 PP_3755 3-hydroxybutyryl-CoA dehydrogenase low > 96
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_08575 ABC transporter substrate-binding protein 0.48 AO353_27535 3-hydroxybutyryl-CoA dehydrogenase low > 101
Rhodospirillum rubrum S1H 0.51 Rru_A1018 extracellular solute-binding protein, family 1 (NCBI) 0.71 Rru_A3079 3-hydroxybutyryl-CoA dehydrogenase (NCBI) low > 58
Escherichia fergusonii Becca 0.50 EFB2_03207 Putrescine-binding periplasmic protein 0.37 EFB2_01907 3-hydroxybutyryl-CoA dehydrogenase 0.35 54
Escherichia coli Nissle 1917 0.50 ECOLIN_RS04550 spermidine/putrescine ABC transporter substrate-binding protein PotF 0.37 ECOLIN_RS11575 colibactin biosynthesis dehydrogenase ClbD — —
Marinobacter adhaerens HP15 0.49 HP15_940 putrescine ABC transporter, periplasmic putrescine-binding protein 0.38 HP15_48 3-hydroxybutyryl-CoA dehydrogenase low > 73
Magnetospirillum magneticum AMB-1 0.46 AMB_RS13210 polyamine ABC transporter substrate-binding protein 0.71 AMB_RS19750 3-hydroxybutyryl-CoA dehydrogenase low > 64
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS07120 polyamine ABC transporter substrate-binding protein 0.48 QEN71_RS37855 3-hydroxybutyryl-CoA dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_05180 putrescine transport system substrate-binding protein 0.45 H281DRAFT_05521 3-hydroxyacyl-CoA dehydrogenase low > 103
Azospirillum brasilense Sp245 0.39 AZOBR_RS08845 ABC transporter substrate-binding protein 0.70 AZOBR_RS29225 3-hydroxybutyryl-CoA dehydrogenase — —
Azospirillum sp. SherDot2 0.37 MPMX19_04883 Spermidine-binding periplasmic protein SpuE 0.68 MPMX19_06153 3-hydroxybutyryl-CoA dehydrogenase low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2035 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 0.50 GFF376 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) low > 90
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_03239 spermidine/putrescine-binding protein 0.70 CCNA_00752 3-hydroxybutyryl-CoA dehydrogenase low > 67
Caulobacter crescentus NA1000 0.22 CCNA_03239 spermidine/putrescine-binding protein 0.70 CCNA_00752 3-hydroxybutyryl-CoA dehydrogenase low > 66
Fusobacterium nucleatum SB010 0.22 HUW76_06130 extracellular solute-binding protein 0.40 HUW76_05010 3-hydroxybutyryl-CoA dehydrogenase low > 35
Acidovorax sp. GW101-3H11 0.12 Ac3H11_189 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) 0.48 Ac3H11_4658 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) — —
Dinoroseobacter shibae DFL-12 0.08 Dshi_2123 extracellular solute-binding protein family 1 (RefSeq) 0.70 Dshi_0214 3-hydroxybutyryl-CoA dehydrogenase (RefSeq) low > 64

Not shown: 41 genomes with orthologs for SMc00770 only; 16 genomes with orthologs for SMc00727 only