Conservation of cofitness between SMc00452 and SM_b20078 in Sinorhizobium meliloti 1021

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00452 A/G-specific adenine glycosylase 1.0 SM_b20078 response regulator 0.27 10
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS19540 adenine glycosylase 0.27 HSERO_RS12850 LuxR family transcriptional regulator low > 78
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS02875 adenine glycosylase 0.23 BPHYT_RS31295 LuxR family transcriptional regulator low > 109
Shewanella loihica PV-4 0.30 Shew_1123 A/G-specific adenine glycosylase (RefSeq) 0.31 Shew_0842 two component LuxR family transcriptional regulator (RefSeq) low > 60
Pantoea sp. MT58 0.30 IAI47_03560 A/G-specific adenine glycosylase 0.27 IAI47_05315 response regulator low > 76
Paraburkholderia graminis OAS925 0.30 ABIE53_000712 A/G-specific adenine glycosylase 0.24 ABIE53_004191 DNA-binding NarL/FixJ family response regulator low > 113
Acinetobacter radioresistens SK82 0.30 MPMX26_02995 Adenine DNA glycosylase 0.27 MPMX26_00164 Response regulator GacA low > 36
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_01933 A/G-specific DNA-adenine glycosylase 0.24 H281DRAFT_03107 two component transcriptional regulator, LuxR family — —
Shewanella amazonensis SB2B 0.30 Sama_2490 A/G-specific adenine glycosylase (RefSeq) 0.32 Sama_0646 response regulator receiver protein (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.30 HER17_RS16625 A/G-specific adenine glycosylase 0.31 HER17_RS09115 nitrate/nitrite response regulator protein NarP low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3065 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.31 GFF1492 Nitrate/nitrite response regulator protein — —
Pseudomonas simiae WCS417 0.29 PS417_01545 adenine glycosylase 0.31 PS417_15740 hypothetical protein low > 88
Pseudomonas putida KT2440 0.29 PP_0286 adenine glycosylase 0.24 PP_2672 Transcriptional activator protein ExaE low > 96
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3846 A/G-specific adenine glycosylase (EC 3.2.2.-) 0.32 Pf6N2E2_725 Nitrate/nitrite response regulator protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_09830 A/G-specific adenine glycosylase 0.34 AO356_30010 transcriptional regulator low > 104
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS01590 A/G-specific adenine glycosylase 0.32 PFLU_RS11480 response regulator low > 109
Pseudomonas sp. RS175 0.29 PFR28_04925 Adenine DNA glycosylase 0.31 PFR28_01628 Nitrate/nitrite response regulator protein NarL low > 88
Pseudomonas fluorescens SBW25 0.29 PFLU_RS01590 A/G-specific adenine glycosylase 0.32 PFLU_RS11480 response regulator low > 109
Enterobacter asburiae PDN3 0.29 EX28DRAFT_2998 A/G-specific DNA-adenine glycosylase (EC 3.2.2.-) 0.28 EX28DRAFT_0848 two component transcriptional regulator, LuxR family low > 76
Lysobacter sp. OAE881 0.29 ABIE51_RS15140 A/G-specific adenine glycosylase 0.30 ABIE51_RS02650 response regulator transcription factor low > 62
Enterobacter sp. TBS_079 0.29 MPMX20_03818 Adenine DNA glycosylase 0.28 MPMX20_02618 Nitrate/nitrite response regulator protein NarL low > 85
Klebsiella michiganensis M5al 0.29 BWI76_RS24155 A/G-specific adenine glycosylase 0.27 BWI76_RS17350 DNA-binding response regulator low > 92
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_1248 A/G-specific adenine glycosylase 0.25 Echvi_1897 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain low > 79
Shewanella oneidensis MR-1 0.28 SO3368 mutY A/G-specific adenine glycosylase (NCBI ptt file) 0.34 SO3982 narP DNA-binding nitrate/nitrite response regulator (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_1181 A/G-specific DNA-adenine glycosylase (RefSeq) 0.34 Shewana3_0656 two component LuxR family transcriptional regulator (RefSeq) low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_14995 A/G-specific adenine glycosylase 0.24 CA264_09180 DNA-binding response regulator low > 74

Not shown: 65 genomes with orthologs for SMc00452 only; 1 genomes with orthologs for SM_b20078 only