| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS35220 | | peptide ABC transporter ATP-binding protein | 1.0 | RR42_RS31465 | | LysR family transcriptional regulator | 0.37 | 16 |
| Azospirillum brasilense Sp245 | 0.51 | AZOBR_RS23930 | | methionine ABC transporter ATP-binding protein | 0.51 | AZOBR_RS01600 | | LysR family transcriptional regulator | low | > 97 |
| Rahnella sp. WP5 | 0.51 | EX31_RS00050 | | ABC transporter ATP-binding protein | 0.28 | EX31_RS21460 | | LysR family transcriptional regulator ArgP | low | > 89 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS16695 | | dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein | 0.28 | BWI76_RS23930 | | transcriptional regulator ArgP | low | > 92 |
| Rhodospirillum rubrum S1H | 0.48 | Rru_A0589 | | Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) | 0.50 | Rru_A0658 | | Transcriptional Regulator, LysR family (NCBI) | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.48 | HER17_RS11005 | | ABC transporter ATP-binding protein | 0.38 | HER17_RS10625 | | HTH-type transcriptional regulator ArgP | low | > 75 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_14190 | | ABC transporter ATP-binding protein | 0.28 | IAI46_20910 | | LysR family transcriptional regulator ArgP | low | > 86 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_03126 | | oligopeptide transport system ATP-binding protein | 0.48 | H281DRAFT_04882 | | transcriptional regulator, LysR family | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.47 | DVU2576 | | oligopeptide ABC transporter, ATP-binding protein (TIGR) | 0.34 | DVU0594 | iciA | chromosome initiation inhibitor (TIGR) | low | > 55 |
| Pantoea sp. MT58 | 0.47 | IAI47_09085 | | ABC transporter ATP-binding protein | 0.28 | IAI47_03715 | | LysR family transcriptional regulator ArgP | low | > 76 |
| Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_262p00330 | | oligopeptide ABC transporter, ATP binding protein | 0.46 | PGA1_c21740 | | transcriptional regulator, ArgP family | low | > 62 |
| Enterobacter asburiae PDN3 | 0.47 | EX28DRAFT_0871 | | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain | 0.28 | EX28DRAFT_2967 | | transcriptional regulator, ArgP family | 0.51 | 39 |
| Enterobacter sp. TBS_079 | 0.47 | MPMX20_02584 | | Oligopeptide transport ATP-binding protein OppD | 0.28 | MPMX20_03773 | | HTH-type transcriptional regulator ArgP | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.46 | OHPLBJKB_02437 | | Oligopeptide transport ATP-binding protein OppD | 0.27 | OHPLBJKB_00800 | | HTH-type transcriptional regulator ArgP | low | > 73 |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS07525 | | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | ECOLIN_RS16225 | | DNA-binding transcriptional regulator ArgP | — | — |
| Escherichia coli ECRC62 | 0.46 | BNILDI_18550 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | BNILDI_09890 | argP | DNA-binding transcriptional regulator ArgP | 0.68 | 32 |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_20405 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | NOLOHH_11355 | argP | DNA-binding transcriptional regulator ArgP | low | > 75 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_25110 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | HEPCGN_18750 | argP | DNA-binding transcriptional regulator ArgP | 0.45 | 58 |
| Escherichia coli BL21 | 0.46 | ECD_01220 | | oligopeptide ABC transporter ATPase | 0.27 | ECD_02747 | | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor | low | > 61 |
| Escherichia coli ECRC98 | 0.46 | JDDGAC_05930 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | JDDGAC_23090 | argP | DNA-binding transcriptional regulator ArgP | low | > 86 |
| Escherichia coli ECRC100 | 0.46 | OKFHMN_28645 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | OKFHMN_19450 | argP | DNA-binding transcriptional regulator ArgP | low | > 80 |
| Escherichia coli ECRC101 | 0.46 | MCAODC_21615 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | MCAODC_09970 | argP | DNA-binding transcriptional regulator ArgP | low | > 87 |
| Escherichia fergusonii Becca | 0.46 | EFB2_02679 | | Oligopeptide transport ATP-binding protein OppD | 0.27 | EFB2_00987 | | HTH-type transcriptional regulator ArgP | 0.43 | 22 |
| Escherichia coli ECRC102 | 0.46 | NIAGMN_27590 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | NIAGMN_17215 | argP | DNA-binding transcriptional regulator ArgP | — | — |
| Escherichia coli ECRC99 | 0.46 | KEDOAH_25640 | oppD | murein tripeptide/oligopeptide ABC transporter ATP-binding protein OppD | 0.27 | KEDOAH_08690 | argP | DNA-binding transcriptional regulator ArgP | — | — |
| Escherichia coli BW25113 | 0.46 | b1246 | oppD | oligopeptide transporter ATP-binding component (NCBI) | 0.27 | b2916 | argP | chromosome replication initiation inhibitor protein (NCBI) | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_21860 | | methionine ABC transporter ATP-binding protein | 0.42 | AO353_03915 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_5104 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.41 | Pf1N1B4_708 | | Chromosome initiation inhibitor | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_3425 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.42 | Pf6N2E2_2849 | | Chromosome initiation inhibitor | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_07715 | | methionine ABC transporter ATP-binding protein | 0.42 | AO356_04995 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas simiae WCS417 | 0.43 | PS417_08075 | | methionine ABC transporter ATP-binding protein | 0.42 | PS417_22165 | | LysR family transcriptional regulator | low | > 88 |
| Shewanella loihica PV-4 | 0.34 | Shew_2501 | | oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) | 0.38 | Shew_1844 | | chromosome replication initiation inhibitor protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_01138 | | putative D,D-dipeptide transport ATP-binding protein DdpD | 0.31 | MIT1002_00129 | | OriC replication inhibitor | — | — |
Not shown: 1 genomes with orthologs for RR42_RS35220 only; 38 genomes with orthologs for RR42_RS31465 only