Conservation of cofitness between RR42_RS03420 and RR42_RS24910 in Cupriavidus basilensis FW507-4G11

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS03420 bile acid:sodium symporter 1.0 RR42_RS24910 hypothetical protein 0.31 12
Ralstonia solanacearum GMI1000 0.64 RS_RS12725 bile acid:sodium symporter 0.25 RS_RS01020 alpha/beta hydrolase low > 80
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS05105 bile acid:sodium symporter 0.31 RALBFv3_RS17050 alpha/beta hydrolase low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS08520 bile acid:sodium symporter 0.31 UW163_RS18440 alpha/beta hydrolase — —
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_0807 Bile acid:sodium symporter (RefSeq) 0.32 DvMF_2946 hypothetical protein (RefSeq) low > 51
Dickeya dadantii 3937 0.42 DDA3937_RS10620 bile acid:sodium symporter 0.24 DDA3937_RS08185 alpha/beta hydrolase low > 74
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_1269 Sodium/bile acid symporter family 0.30 Pf1N1B4_5130 FIG01220323: hypothetical protein low > 87
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0648 transporter, putative 0.23 Psyr_3799 conserved hypothetical protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0648 transporter, putative 0.23 Psyr_3799 conserved hypothetical protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3491 Sodium/bile acid symporter family 0.23 Pf6N2E2_1915 Dienelactone hydrolase and related enzymes low > 103
Escherichia coli Nissle 1917 0.40 ECOLIN_RS13845 bile acid:sodium symporter family protein 0.73 ECOLIN_RS07970 alpha/beta hydrolase low > 55
Escherichia coli ECRC101 0.40 MCAODC_12755 yfeH Putative symporter YfeH 0.73 MCAODC_16000 ycjY Uncharacterized protein YcjY low > 87
Escherichia fergusonii Becca 0.40 EFB2_01467 hypothetical protein 0.73 EFB2_02599 putative protein YcjY low > 86
Escherichia coli ECRC99 0.40 KEDOAH_05995 yfeH Putative symporter YfeH 0.72 KEDOAH_26500 mpaA murein tripeptide amidase MpaA — —
Escherichia coli ECRC100 0.40 OKFHMN_22225 yfeH Putative symporter YfeH 0.73 OKFHMN_02270 ycjY Uncharacterized protein YcjY low > 80
Escherichia coli ECRC98 0.40 JDDGAC_26175 yfeH Putative symporter YfeH 0.73 JDDGAC_04815 ycjY Uncharacterized protein YcjY low > 86
Escherichia coli ECRC102 0.40 NIAGMN_19995 yfeH Putative symporter YfeH 0.73 NIAGMN_26440 ycjY Uncharacterized protein YcjY — —
Escherichia coli ECRC62 0.40 BNILDI_12770 yfeH Putative symporter YfeH 0.73 BNILDI_18120 ycjY Uncharacterized protein YcjY low > 75
Escherichia coli ECOR27 0.40 NOLOHH_13905 yfeH Putative symporter YfeH 0.73 NOLOHH_19970 ycjY Uncharacterized protein YcjY low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01314 hypothetical protein 0.72 OHPLBJKB_02354 putative protein YcjY low > 73
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS18220 bile acid:sodium symporter 0.23 PFLU_RS16795 alpha/beta hydrolase low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS18220 bile acid:sodium symporter 0.23 PFLU_RS16795 alpha/beta hydrolase low > 109
Pseudomonas sp. RS175 0.40 PFR28_05240 hypothetical protein 0.24 PFR28_02304 hypothetical protein low > 88
Rahnella sp. WP5 0.40 EX31_RS06855 bile acid:sodium symporter 0.29 EX31_RS17660 alpha/beta hydrolase low > 89
Escherichia coli BW25113 0.40 b2410 yfeH predicted inner membrane protein (NCBI) 0.72 b1327 ycjY predicted hydrolase (RefSeq) low > 76
Escherichia coli BL21 0.40 ECD_02309 putative inorganic ion transporter 0.72 ECD_01305 S9-like protein non-peptidase family protein low > 61
Variovorax sp. SCN45 0.39 GFF6063 Sodium/bile acid symporter family 0.27 GFF2724 FIG01220323: hypothetical protein low > 127
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_08085 bile acid:sodium symporter 0.27 AO356_24045 alpha/beta hydrolase low > 104
Paraburkholderia graminis OAS925 0.39 ABIE53_000558 sodium/bile acid cotransporter 7 0.25 ABIE53_005641 fermentation-respiration switch protein FrsA (DUF1100 family) low > 113
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS17040 bile acid:sodium symporter family protein 0.25 ABZR86_RS17785 alpha/beta hydrolase low > 74
Serratia liquefaciens MT49 0.38 IAI46_18420 bile acid:sodium symporter 0.29 IAI46_12395 alpha/beta hydrolase low > 86
Enterobacter sp. TBS_079 0.38 MPMX20_03303 hypothetical protein 0.27 MPMX20_00064 hypothetical protein 0.31 65
Pectobacterium carotovorum WPP14 0.38 HER17_RS10785 bile acid:sodium symporter 0.34 HER17_RS13665 alpha/beta hydrolase low > 75
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02065 membrane protein 0.26 BPHYT_RS00190 membrane protein low > 109
Pantoea sp. MT58 0.35 IAI47_05465 bile acid:sodium symporter 0.26 IAI47_21435 alpha/beta hydrolase low > 76
Echinicola vietnamensis KMM 6221, DSM 17526 0.33 Echvi_3715 Predicted Na+-dependent transporter 0.29 Echvi_4173 Hydrolases of the alpha/beta superfamily low > 79

Not shown: 34 genomes with orthologs for RR42_RS03420 only; 7 genomes with orthologs for RR42_RS24910 only