Conservation of cofitness between RR42_RS03890 and RR42_RS20450 in Cupriavidus basilensis FW507-4G11

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS03890 paraquat-inducible protein A 1.0 RR42_RS20450 16S rRNA methyltransferase 0.37 6
Variovorax sp. SCN45 0.49 GFF1388 Paraquat-inducible protein A 0.36 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS15880 paraquat-inducible protein A 0.35 ABID97_RS05360 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 91
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS26685 paraquat-inducible protein A 0.53 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 153
Paraburkholderia graminis OAS925 0.48 ABIE53_005386 paraquat-inducible protein A 0.52 ABIE53_000392 16S rRNA (cytosine967-C5)-methyltransferase low > 113
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS03455 paraquat-inducible protein A 0.54 BPHYT_RS01475 16S rRNA methyltransferase low > 109
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS17175 paraquat-inducible protein A 0.43 HSERO_RS00355 methyltransferase low > 78
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS08265 paraquat-inducible protein A 0.54 ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS20985 paraquat-inducible protein A 0.55 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 81
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS12325 paraquat-inducible protein A 0.51 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS01280 paraquat-inducible protein A 0.51 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB — —
Ralstonia solanacearum GMI1000 0.44 RS_RS03010 paraquat-inducible protein A 0.52 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 80
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_3225 Paraquat-inducible protein A 0.28 PfGW456L13_652 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_4822 Paraquat-inducible protein A 0.29 Pf1N1B4_1914 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 87
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04615 paraquat-inducible protein A 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04615 paraquat-inducible protein A 0.29 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB low > 109
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_3044 Paraquat-inducible protein A 0.28 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_3044 Paraquat-inducible protein A 0.28 Psyr_0017 16S rRNA m(5)C-967 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2140 Paraquat-inducible protein A 0.29 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_29370 paraquat-inducible protein A 0.29 AO353_10630 16S rRNA methyltransferase low > 101
Pseudomonas sp. RS175 0.40 PFR28_03687 Intermembrane transport protein PqiA 0.28 PFR28_04663 Ribosomal RNA small subunit methyltransferase B low > 88
Pseudomonas putida KT2440 0.39 PP_5745 paraquat-inducible protein A 0.29 PP_0066 Ribosomal RNA small subunit methyltransferase B low > 96
Pseudomonas stutzeri RCH2 0.39 Psest_1049 Uncharacterized paraquat-inducible protein A 0.30 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB low > 67
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16230 paraquat-inducible protein A 0.28 AO356_11275 16S rRNA methyltransferase low > 104
Pseudomonas simiae WCS417 0.38 PS417_03270 paraquat-inducible protein A 0.29 PS417_00085 16S rRNA methyltransferase low > 88
Pseudomonas sp. S08-1 0.36 OH686_01590 Paraquat-inducible protein A 0.28 OH686_12525 16S rRNA (cytosine(967)-C(5))-methyltransferase low > 80
Shewanella loihica PV-4 0.30 Shew_1797 paraquat-inducible protein A (RefSeq) 0.27 Shew_3738 sun protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.29 Sama_1580 paraquat-inducible protein A (RefSeq) 0.29 Sama_0041 sun protein (RefSeq) low > 62

Not shown: 5 genomes with orthologs for RR42_RS03890 only; 42 genomes with orthologs for RR42_RS20450 only