Conservation of cofitness between RR42_RS20855 and RR42_RS14985 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS20855 cold-shock protein 1.0 RR42_RS14985 30S ribosomal protein S21 0.43 20
Burkholderia phytofirmans PsJN 0.84 BPHYT_RS34185 cold-shock protein 0.86 BPHYT_RS33555 30S ribosomal protein S21 low > 109
Rhodanobacter denitrificans FW104-10B01 0.75 LRK54_RS17025 cold-shock protein 0.61 LRK54_RS07035 30S ribosomal protein S21 — —
Rhodanobacter denitrificans MT42 0.75 LRK55_RS16740 cold-shock protein 0.61 LRK55_RS06775 30S ribosomal protein S21 — —
Shewanella amazonensis SB2B 0.74 Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) 0.47 Sama_0826 rpsU 30S ribosomal protein S21 (RefSeq) — —
Shewanella sp. ANA-3 0.73 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) 0.48 Shewana3_3084 rpsU 30S ribosomal protein S21 (RefSeq) — —
Shewanella oneidensis MR-1 0.73 SO2628 cspD stress response protein CspD (NCBI ptt file) 0.48 SO1288 rpsU ribosomal protein S21 (NCBI ptt file) — —
Rhodanobacter sp. FW510-T8 0.72 OKGIIK_07815 cspC cold-shock protein 0.61 OKGIIK_16600 rpsU 30S ribosomal protein S21 — —
Shewanella loihica PV-4 0.72 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) 0.48 Shew_0999 rpsU 30S ribosomal protein S21 (RefSeq) — —
Alteromonas macleodii MIT1002 0.70 MIT1002_01832 Cold shock-like protein CspD 0.46 MIT1002_00737 30S ribosomal protein S21 — —
Rahnella sp. WP5 0.69 EX31_RS18570 cold shock-like protein CspD 0.59 EX31_RS08185 30S ribosomal protein S21 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF4903 Cold shock protein CspD 0.59 GFF3175 SSU ribosomal protein S21p — —
Dickeya dadantii 3937 0.68 DDA3937_RS09550 cold shock-like protein CspD 0.59 DDA3937_RS02955 30S ribosomal protein S21 — —
Dickeya dianthicola ME23 0.68 DZA65_RS09875 cold shock-like protein CspD 0.59 DZA65_RS03115 30S ribosomal protein S21 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_02788 Cold shock-like protein CspD 0.59 OHPLBJKB_00637 30S ribosomal protein S21 — —
Escherichia coli BL21 0.68 ECD_00885 inhibitor of DNA replication, cold shock protein-like protein 0.59 ECD_02935 30S ribosomal subunit protein S21 — —
Escherichia coli ECOR38 0.68 HEPCGN_22885 cspD cold shock-like protein CspD 0.59 HEPCGN_17520 rpsU 30S ribosomal protein S21 — —
Escherichia coli ECRC98 0.68 JDDGAC_09435 cspD cold shock-like protein CspD 0.59 JDDGAC_22300 rpsU 30S ribosomal protein S21 — —
Escherichia coli ECRC99 0.68 KEDOAH_22110 cspD cold shock-like protein CspD 0.59 KEDOAH_09480 rpsU 30S ribosomal protein S21 — —
Escherichia coli ECOR27 0.68 NOLOHH_22195 cspD cold shock-like protein CspD 0.59 NOLOHH_10455 rpsU 30S ribosomal protein S21 — —
Escherichia coli BW25113 0.68 b0880 cspD cold shock protein homolog (NCBI) 0.59 b3065 rpsU 30S ribosomal protein S21 (NCBI) — —
Klebsiella michiganensis M5al 0.68 BWI76_RS09605 cold-shock protein 0.59 BWI76_RS24545 30S ribosomal protein S21 — —
Pantoea sp. MT58 0.68 IAI47_12955 cold shock-like protein CspD 0.59 IAI47_03060 30S ribosomal protein S21 — —
Escherichia coli ECRC100 0.68 OKFHMN_05800 cspD cold shock-like protein CspD 0.59 OKFHMN_18665 rpsU 30S ribosomal protein S21 — —
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_18795 cold-shock protein CspV 0.58 CSW01_02760 30S ribosomal protein S21 — —
Escherichia coli ECRC101 0.68 MCAODC_25015 cspD cold shock-like protein CspD 0.59 MCAODC_09180 rpsU 30S ribosomal protein S21 — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS04685 cold shock-like protein CspD 0.59 ECOLIN_RS17695 30S ribosomal protein S21 — —
Escherichia coli ECRC62 0.68 BNILDI_20450 cspD cold shock-like protein CspD 0.59 BNILDI_01060 rpsU 30S ribosomal protein S21 — —
Escherichia fergusonii Becca 0.68 EFB2_03181 Cold shock-like protein CspD 0.59 EFB2_00746 30S ribosomal protein S21 — —
Escherichia coli ECRC102 0.68 NIAGMN_03840 cspD cold shock-like protein CspD 0.59 NIAGMN_16430 rpsU 30S ribosomal protein S21 — —
Dickeya dianthicola 67-19 0.68 HGI48_RS09565 cold shock-like protein CspD 0.59 HGI48_RS03120 30S ribosomal protein S21 — —
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2052 cold shock domain protein CspD 0.59 EX28DRAFT_3100 ribosomal protein S21 — —
Enterobacter sp. TBS_079 0.67 MPMX20_01542 Cold shock-like protein CspD 0.59 MPMX20_03907 30S ribosomal protein S21 — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS12410 cold shock-like protein CspD 0.59 HER17_RS18405 30S ribosomal protein S21 — —
Pseudomonas fluorescens SBW25 0.66 PFLU_RS21685 cold-shock protein 0.63 PFLU_RS31170 30S ribosomal protein S21 — —
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS21685 cold-shock protein 0.63 PFLU_RS31170 30S ribosomal protein S21 — —
Pseudomonas sp. S08-1 0.64 OH686_17410 Cold shock protein of CSP family 0.63 OH686_14980 ribosomal protein S21 — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1826 Cold shock proteins 0.50 B158DRAFT_0822 ribosomal protein S21 — —
Marinobacter adhaerens HP15 0.62 HP15_2054 cold shock, CspA 0.43 HP15_317 ribosomal protein S21 — —

Not shown: 22 genomes with orthologs for RR42_RS20855 only; 27 genomes with orthologs for RR42_RS14985 only