Conservation of cofitness between Psyr_0025 and Psyr_4898 in Pseudomonas syringae pv. syringae B728a

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0025 shikimate dehydrogenase 1.0 Psyr_4898 aromatic amino acid aminotransferase apoenzyme 0.63 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0025 shikimate dehydrogenase 1.00 Psyr_4898 aromatic amino acid aminotransferase apoenzyme 0.74 2
Pseudomonas putida KT2440 0.77 PP_0074 shikimate 5-dehydrogenase 0.66 PP_3590 aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) — —
Dechlorosoma suillum PS 0.56 Dsui_0443 shikimate 5-dehydrogenase 0.60 Dsui_1904 aspartate/tyrosine/aromatic aminotransferase — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS01990 shikimate 5-dehydrogenase 0.54 HSERO_RS22025 aromatic amino acid aminotransferase low > 78
Marinobacter adhaerens HP15 0.52 HP15_3750 shikimate dehydrogenase 0.42 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 0.65 OHPLBJKB_03989 Aromatic-amino-acid aminotransferase low > 73
Escherichia coli BL21 0.49 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 0.65 ECD_03926 tyrosine aminotransferase, tyrosine-repressible, PLP-dependent low > 61
Escherichia coli Nissle 1917 0.49 ECOLIN_RS18840 shikimate dehydrogenase 0.64 ECOLIN_RS23420 aromatic amino acid transaminase low > 55
Escherichia coli BW25113 0.49 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 0.65 b4054 tyrB tyrosine aminotransferase, tyrosine-repressible, PLP-dependent (NCBI) low > 76
Escherichia coli ECRC62 0.49 BNILDI_02165 aroE shikimate dehydrogenase 0.64 BNILDI_06355 tyrB aromatic amino acid transaminase low > 75
Escherichia coli ECOR27 0.49 NOLOHH_09355 aroE shikimate dehydrogenase 0.65 NOLOHH_05170 tyrB aromatic amino acid transaminase low > 75
Escherichia coli ECRC98 0.49 JDDGAC_21185 aroE shikimate dehydrogenase 0.64 JDDGAC_16555 tyrB aromatic amino acid transaminase low > 86
Escherichia coli ECRC101 0.49 MCAODC_08085 aroE shikimate dehydrogenase 0.64 MCAODC_03430 tyrB aromatic amino acid transaminase low > 87
Escherichia coli ECRC100 0.49 OKFHMN_17565 aroE shikimate dehydrogenase 0.64 OKFHMN_12920 tyrB aromatic amino acid transaminase low > 80
Escherichia coli ECRC99 0.49 KEDOAH_10585 aroE shikimate dehydrogenase 0.64 KEDOAH_15230 tyrB aromatic amino acid transaminase — —
Escherichia coli ECRC102 0.49 NIAGMN_15325 aroE shikimate dehydrogenase 0.64 NIAGMN_10765 tyrB aromatic amino acid transaminase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS27130 shikimate dehydrogenase 0.54 QEN71_RS09725 amino acid aminotransferase low > 153
Pantoea sp. MT58 0.49 IAI47_02315 shikimate dehydrogenase 0.64 IAI47_17835 aspartate/tyrosine/aromatic aminotransferase — —
Paraburkholderia graminis OAS925 0.48 ABIE53_003560 shikimate dehydrogenase 0.53 ABIE53_005919 aromatic-amino-acid transaminase — —
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.54 H281DRAFT_02875 aromatic-amino-acid transaminase — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS16975 shikimate 5-dehydrogenase 0.54 BPHYT_RS26755 aromatic amino acid aminotransferase low > 109
Escherichia fergusonii Becca 0.48 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 0.64 EFB2_04546 Aromatic-amino-acid aminotransferase low > 86
Escherichia coli ECOR38 0.47 HEPCGN_16385 aroE shikimate dehydrogenase 0.65 HEPCGN_11535 tyrB aromatic amino acid transaminase low > 87
Dickeya dianthicola ME23 0.47 DZA65_RS20315 shikimate dehydrogenase 0.65 DZA65_RS18680 aspartate/tyrosine/aromatic aminotransferase — —
Klebsiella michiganensis M5al 0.47 BWI76_RS25645 shikimate dehydrogenase 0.64 BWI76_RS01925 aromatic amino acid aminotransferase low > 92
Enterobacter sp. TBS_079 0.47 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) 0.64 MPMX20_00272 Aromatic-amino-acid aminotransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.63 GFF1423 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) low > 78
Dickeya dianthicola 67-19 0.46 HGI48_RS19190 shikimate dehydrogenase 0.65 HGI48_RS17595 aspartate/tyrosine/aromatic aminotransferase — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17645 shikimate dehydrogenase 0.55 RR42_RS33490 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) (from data) low > 128
Dickeya dadantii 3937 0.46 DDA3937_RS19100 shikimate dehydrogenase 0.64 DDA3937_RS17545 aspartate/tyrosine/aromatic aminotransferase — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_0046 shikimate dehydrogenase 0.65 EX28DRAFT_4250 Aspartate/tyrosine/aromatic aminotransferase low > 76
Pectobacterium carotovorum WPP14 0.46 HER17_RS02250 shikimate dehydrogenase 0.66 HER17_RS03625 aspartate/tyrosine/aromatic aminotransferase low > 75
Serratia liquefaciens MT49 0.46 IAI46_23240 shikimate dehydrogenase 0.67 IAI46_22930 aspartate/tyrosine/aromatic aminotransferase low > 86
Erwinia tracheiphila SCR3 0.44 LU632_RS22445 aroE shikimate dehydrogenase 0.66 LU632_RS23705 aspartate/tyrosine/aromatic aminotransferase low > 74
Rahnella sp. WP5 0.44 EX31_RS15950 shikimate dehydrogenase 0.66 EX31_RS11910 aspartate/tyrosine/aromatic aminotransferase — —
Alteromonas macleodii MIT1002 0.37 MIT1002_00029 Shikimate dehydrogenase 0.40 MIT1002_02269 Aspartate aminotransferase — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.62 MPMX26_01473 Aromatic-amino-acid aminotransferase low > 36
Phaeobacter inhibens DSM 17395 0.22 PGA1_c35150 shikimate dehydrogenase AroE 0.33 PGA1_c29420 aromatic-amino-acid transaminase [EC:2.6.1.57] (from data) — —
Sinorhizobium meliloti 1021 0.22 SMc02791 shikimate 5-dehydrogenase 0.31 SMc00387 aromatic amino acid aminotransferase — —
Azospirillum sp. SherDot2 0.18 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.30 MPMX19_05266 Aspartate aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.35 Ga0059261_1688 Aspartate/tyrosine/aromatic aminotransferase low > 68

Not shown: 50 genomes with orthologs for Psyr_0025 only; 0 genomes with orthologs for Psyr_4898 only