Conservation of cofitness between Psyr_1322 and Psyr_4381 in Pseudomonas syringae pv. syringae B728a ΔmexB

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a ΔmexB 1.0 Psyr_1322 Protein of unknown function DUF72 1.0 Psyr_4381 arginine decarboxylase 0.42 15
Pseudomonas syringae pv. syringae B728a 1.00 Psyr_1322 Protein of unknown function DUF72 1.00 Psyr_4381 arginine decarboxylase low > 86
Pseudomonas simiae WCS417 0.76 PS417_06080 hypothetical protein 0.95 PS417_03005 arginine decarboxylase low > 88
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_4736 FIG003003: hypothetical protein 0.94 PfGW456L13_43 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 87
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_16330 hypothetical protein 0.94 AO353_13720 arginine decarboxylase low > 101
Pseudomonas fluorescens SBW25 0.73 PFLU_RS06150 DUF72 domain-containing protein 0.95 PFLU_RS03080 arginine decarboxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS06150 DUF72 domain-containing protein 0.95 PFLU_RS03080 arginine decarboxylase 0.15 66
Pseudomonas putida KT2440 0.71 PP_1509 conserved protein of unknown function 0.95 PP_0567 Biosynthetic arginine decarboxylase low > 96
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_3055 FIG003003: hypothetical protein 0.95 Pf1N1B4_1296 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_06165 hypothetical protein 0.95 AO356_08155 arginine decarboxylase 0.27 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3099 FIG003003: hypothetical protein 0.94 Pf6N2E2_3504 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 103
Pseudomonas sp. RS175 0.67 PFR28_00372 hypothetical protein 0.95 PFR28_05228 Biosynthetic arginine decarboxylase low > 88
Pseudomonas sp. S08-1 0.64 OH686_06775 UPF0759 protein YecE 0.87 OH686_07545 arginine decarboxylase low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_1561 Uncharacterized conserved protein 0.85 Psest_3366 Biosynthetic arginine decarboxylase (EC 4.1.1.19) (from data) low > 67
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_05905 DUF72 domain-containing protein 0.43 CSW01_18235 arginine decarboxylase low > 62
Shewanella sp. ANA-3 0.38 Shewana3_0893 hypothetical protein (RefSeq) 0.44 Shewana3_1624 arginine decarboxylase (RefSeq) low > 73
Rahnella sp. WP5 0.35 EX31_RS17275 DUF72 domain-containing protein 0.41 EX31_RS21355 biosynthetic arginine decarboxylase low > 89
Enterobacter sp. TBS_079 0.34 MPMX20_02773 hypothetical protein 0.41 MPMX20_03799 Biosynthetic arginine decarboxylase low > 85
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0689 Uncharacterized conserved protein 0.41 EX28DRAFT_2978 arginine decarboxylase (EC 4.1.1.19) low > 76
Erwinia tracheiphila SCR3 0.33 LU632_RS13445 DUF72 domain-containing protein 0.41 LU632_RS05510 speA biosynthetic arginine decarboxylase low > 74
Serratia liquefaciens MT49 0.32 IAI46_14660 DUF72 domain-containing protein 0.41 IAI46_21140 biosynthetic arginine decarboxylase low > 86
Klebsiella michiganensis M5al 0.32 BWI76_RS18180 hypothetical protein 0.41 BWI76_RS24030 arginine decarboxylase low > 92
Escherichia coli BL21 0.32 ECD_01839 UPF0759 family protein 0.41 ECD_02768 biosynthetic arginine decarboxylase, PLP-binding — —
Escherichia coli ECOR27 0.32 NOLOHH_16680 yecE UPF0759 protein YecE 0.41 NOLOHH_11175 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli ECRC62 0.32 BNILDI_15470 yecE UPF0759 protein YecE 0.41 BNILDI_09755 speA biosynthetic arginine decarboxylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01860 hypothetical protein 0.41 OHPLBJKB_00778 Biosynthetic arginine decarboxylase low > 73
Escherichia coli BW25113 0.32 b1868 yecE hypothetical protein (NCBI) 0.41 b2938 speA arginine decarboxylase (NCBI) low > 76
Escherichia coli ECOR38 0.32 HEPCGN_04645 yecE UPF0759 protein YecE 0.41 HEPCGN_18610 speA biosynthetic arginine decarboxylase low > 87
Escherichia fergusonii Becca 0.32 EFB2_02074 hypothetical protein 0.41 EFB2_00962 Biosynthetic arginine decarboxylase low > 86
Pantoea sp. MT58 0.32 IAI47_08420 DUF72 domain-containing protein 0.41 IAI47_03660 biosynthetic arginine decarboxylase low > 76
Escherichia coli ECRC98 0.32 JDDGAC_00810 yecE UPF0759 protein YecE 0.41 JDDGAC_22935 speA biosynthetic arginine decarboxylase low > 86
Escherichia coli ECRC102 0.32 NIAGMN_01825 yecE UPF0759 protein YecE 0.41 NIAGMN_17070 speA biosynthetic arginine decarboxylase — —
Escherichia coli ECRC100 0.32 OKFHMN_26235 yecE UPF0759 protein YecE 0.41 OKFHMN_19305 speA biosynthetic arginine decarboxylase low > 80
Escherichia coli ECRC99 0.32 KEDOAH_01870 yecE UPF0759 protein YecE 0.41 KEDOAH_08835 speA biosynthetic arginine decarboxylase — —
Shewanella amazonensis SB2B 0.32 Sama_3238 hypothetical protein (RefSeq) 0.45 Sama_1963 arginine decarboxylase (RefSeq) low > 62
Escherichia coli ECRC101 0.32 MCAODC_19170 yecE UPF0759 protein YecE 0.41 MCAODC_09825 speA biosynthetic arginine decarboxylase low > 87
Alteromonas macleodii MIT1002 0.32 MIT1002_01328 hypothetical protein 0.36 MIT1002_03905 Biosynthetic arginine decarboxylase low > 70
Dickeya dadantii 3937 0.31 DDA3937_RS10050 DUF72 domain-containing protein 0.41 DDA3937_RS18535 biosynthetic arginine decarboxylase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1649 FIG003003: hypothetical protein 0.41 GFF3040 Biosynthetic arginine decarboxylase (EC 4.1.1.19) low > 78
Dickeya dianthicola 67-19 0.31 HGI48_RS10080 DUF72 domain-containing protein 0.41 HGI48_RS18460 biosynthetic arginine decarboxylase low > 71
Escherichia coli Nissle 1917 0.30 ECOLIN_RS10685 DUF72 domain-containing protein 0.41 ECOLIN_RS16350 biosynthetic arginine decarboxylase low > 55
Dickeya dianthicola ME23 0.30 DZA65_RS10490 DUF72 domain-containing protein 0.41 DZA65_RS19595 biosynthetic arginine decarboxylase low > 75
Pectobacterium carotovorum WPP14 0.30 HER17_RS11875 DUF72 domain-containing protein 0.41 HER17_RS02665 biosynthetic arginine decarboxylase low > 75
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_2024 hypothetical protein 0.38 Synpcc7942_1037 speA arginine decarboxylase — —

Not shown: 0 genomes with orthologs for Psyr_1322 only; 18 genomes with orthologs for Psyr_4381 only