Conservation of cofitness between Psyr_4754 and Psyr_4078 in Pseudomonas syringae pv. syringae B728a

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.0 Psyr_4078 AmpG-related permease 0.29 2
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4754 16S rRNA m(2)G-966 methyltransferase 1.00 Psyr_4078 AmpG-related permease low > 86
Pseudomonas stutzeri RCH2 0.73 Psest_0255 RNA methyltransferase, RsmD family 0.57 Psest_1144 AmpG-related permease — —
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.84 Pf6N2E2_2971 AmpG permease low > 103
Pseudomonas sp. S08-1 0.72 OH686_14220 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.64 OH686_08200 AmpG permease low > 80
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2320 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.84 Pf1N1B4_3168 AmpG permease — —
Pseudomonas sp. RS175 0.71 PFR28_04262 Ribosomal RNA small subunit methyltransferase D 0.84 PFR28_00495 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_13320 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.85 AO356_05555 AmpG family muropeptide MFS transporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_08265 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.83 AO353_16925 AmpG family muropeptide MFS transporter low > 101
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.84 PFLU_RS24475 AmpG family muropeptide MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28470 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.84 PFLU_RS24475 AmpG family muropeptide MFS transporter low > 109
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_990 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) 0.84 PfGW456L13_4645 AmpG permease low > 87
Pseudomonas simiae WCS417 0.70 PS417_26825 16S rRNA methyltransferase 0.82 PS417_22815 permease — —
Pseudomonas putida KT2440 0.68 PP_5114 putative adenine methyltransferase 0.80 PP_1355 Muropeptide permease AmpG 0.54 18
Marinobacter adhaerens HP15 0.46 HP15_3491 conserved hypothetical protein 0.30 HP15_2363 major facilitator superfamily MFS_1 — —
Shewanella sp. ANA-3 0.46 Shewana3_3973 putative methyltransferase (RefSeq) 0.38 Shewana3_0783 major facilitator transporter (RefSeq) low > 73
Shewanella loihica PV-4 0.44 Shew_3607 putative methyltransferase (RefSeq) 0.38 Shew_2892 major facilitator transporter (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_00740 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.19 CSW01_11705 MFS transporter low > 62
Shewanella oneidensis MR-1 0.43 SO4587 conserved hypothetical protein TIGR00095 (NCBI ptt file) 0.39 SO3814 ampG protein, putative (NCBI ptt file) low > 76
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_02580 rsmD 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.23 OKGIIK_15695 MFS transporter low > 52
Shewanella amazonensis SB2B 0.42 Sama_3469 hypothetical protein (RefSeq) 0.36 Sama_2556 AmpG protein, putative (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_0443 16S rRNA m(2)G-966 methyltransferase (EC 2.1.1.52) 0.31 B158DRAFT_0920 Major Facilitator Superfamily. low > 40
Dechlorosoma suillum PS 0.36 Dsui_1027 RNA methyltransferase, RsmD family 0.16 Dsui_0739 Major Facilitator Superfamily transporter low > 51
Caulobacter crescentus NA1000 0.29 CCNA_00227 methyltransferase 0.16 CCNA_00136 AmpG protein low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_00227 methyltransferase 0.16 CCNA_00136 AmpG protein low > 67
Rhodospirillum rubrum S1H 0.24 Rru_A0653 hypothetical protein (NCBI) 0.34 Rru_A0147 Major facilitator superfamily MFS_1 (NCBI) — —
Magnetospirillum magneticum AMB-1 0.23 AMB_RS20860 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 0.24 AMB_RS22710 MFS transporter low > 64

Not shown: 57 genomes with orthologs for Psyr_4754 only; 3 genomes with orthologs for Psyr_4078 only