Conservation of cofitness between Psyr_0471 and Psyr_2365 in Pseudomonas syringae pv. syringae B728a

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 1.0 Psyr_2365 Radical SAM 0.32 17
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0471 coproporphyrinogen III oxidase, anaerobic 1.00 Psyr_2365 Radical SAM low > 86
Pseudomonas simiae WCS417 0.81 PS417_26760 oxidase 0.89 PS417_17620 biotin synthase low > 88
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS28405 radical SAM family heme chaperone HemW 0.88 PFLU_RS19410 putative DNA modification/repair radical SAM protein low > 109
Pseudomonas fluorescens SBW25 0.81 PFLU_RS28405 radical SAM family heme chaperone HemW 0.88 PFLU_RS19410 putative DNA modification/repair radical SAM protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_13390 coproporphyrinogen III oxidase 0.78 AO356_01935 biotin synthase low > 104
Pseudomonas sp. RS175 0.77 PFR28_04249 Heme chaperone HemW 0.79 PFR28_01195 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.74 OH686_11020 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.76 OH686_10955 Biotin synthase related domain containing protein low > 80
Pseudomonas putida KT2440 0.73 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.79 PP_2924 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.71 Psest_0276 putative oxygen-independent coproporphyrinogen III oxidase 0.80 Psest_0288 putative DNA modification/repair radical SAM protein low > 67
Alteromonas macleodii MIT1002 0.49 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 0.54 MIT1002_02412 putative DNA modification/repair radical SAM protein low > 70
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.1224.1 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.60 Xcc-8004.4643.1 Biotin synthase related domain containing protein low > 74
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04010 oxygen-independent coproporphyrinogen-3 oxidase 0.70 H281DRAFT_05149 putative DNA modification/repair radical SAM protein low > 103
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS03635 radical SAM family heme chaperone HemW 0.69 QEN71_RS06955 putative DNA modification/repair radical SAM protein low > 153
Variovorax sp. OAS795 0.47 ABID97_RS23630 radical SAM family heme chaperone HemW 0.52 ABID97_RS06030 putative DNA modification/repair radical SAM protein low > 91
Variovorax sp. SCN45 0.46 GFF2383 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW 0.53 GFF4562 Biotin synthase related domain containing protein low > 127
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS15335 coproporphyrinogen III oxidase 0.70 BPHYT_RS11600 biotin synthase low > 109
Acinetobacter radioresistens SK82 0.44 MPMX26_00308 Heme chaperone HemW 0.46 MPMX26_02125 hypothetical protein — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_3672 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 0.55 Ac3H11_3319 Biotin synthase related domain containing protein — —
Azospirillum sp. SherDot2 0.32 MPMX19_02574 Heme chaperone HemW 0.57 MPMX19_06714 hypothetical protein low > 112
Phaeobacter inhibens DSM 17395 0.30 PGA1_c35050 oxygen-independent coproporphyrinogen III oxidase HemN 0.56 PGA1_262p00550 putative DNA modification/repair radical SAM protein low > 62
Agrobacterium fabrum C58 0.29 Atu0325 oxygen-independent coproporphyrinogen III oxidase 0.56 Atu2181 hypothetical protein — —
Rhizobium sp. OAE497 0.29 ABIE40_RS01625 radical SAM family heme chaperone HemW 0.55 ABIE40_RS12835 putative DNA modification/repair radical SAM protein — —
Bosea sp. OAE506 0.28 ABIE41_RS03305 radical SAM family heme chaperone HemW 0.53 ABIE41_RS13090 putative DNA modification/repair radical SAM protein low > 77
Rhodopseudomonas palustris CGA009 0.28 TX73_001700 radical SAM family heme chaperone HemW 0.59 TX73_009260 putative DNA modification/repair radical SAM protein — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.52 CCNA_02417 biotin synthase related domain containing protein low > 67
Caulobacter crescentus NA1000 0.27 CCNA_00144 oxygen-independent coproporphyrinogen-III oxidase 0.52 CCNA_02417 biotin synthase related domain containing protein low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.26 A4249_RS12445 radical SAM family heme chaperone HemW 0.58 A4249_RS08610 putative DNA modification/repair radical SAM protein low > 48
Sphingomonas koreensis DSMZ 15582 0.26 Ga0059261_2753 putative oxygen-independent coproporphyrinogen III oxidase 0.55 Ga0059261_3856 putative DNA modification/repair radical SAM protein low > 68
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS11035 radical SAM family heme chaperone HemW 0.48 HMPREF1078_RS16560 putative DNA modification/repair radical SAM protein low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_16765 coproporphyrinogen III oxidase 0.51 CA264_13660 putative DNA modification/repair radical SAM protein low > 74
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS00100 radical SAM family heme chaperone HemW 0.47 ABI39_RS12700 putative DNA modification/repair radical SAM protein low > 72
Phocaeicola vulgatus CL09T03C04 0.23 HMPREF1058_RS07680 radical SAM family heme chaperone HemW 0.47 HMPREF1058_RS16785 putative DNA modification/repair radical SAM protein low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS18155 coproporphyrinogen III oxidase 0.46 CA265_RS21825 putative DNA modification/repair radical SAM protein low > 88
Bacteroides stercoris CC31F 0.22 HMPREF1181_RS06440 radical SAM family heme chaperone HemW 0.46 HMPREF1181_RS13800 putative DNA modification/repair radical SAM protein low > 56
Bacteroides thetaiotaomicron VPI-5482 0.21 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) 0.47 BT4482 conserved hypothetical protein (NCBI ptt file) low > 81

Not shown: 63 genomes with orthologs for Psyr_0471 only; 2 genomes with orthologs for Psyr_2365 only