Conservation of cofitness between Psyr_4909 and Psyr_0544 in Pseudomonas syringae pv. syringae B728a

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.0 Psyr_0544 hydroxymethylpyrimidine synthase 0.37 10
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 1.00 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas simiae WCS417 0.89 PS417_01505 gamma-aminobutyrate transporter 0.96 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Pseudomonas fluorescens SBW25 0.89 PFLU_RS01545 GABA permease 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS01545 GABA permease 0.96 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_12005 GABA permease 0.94 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_375 transport permease protein of gamma-aminobutyrate 0.94 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_4195 transport permease protein of gamma-aminobutyrate 0.95 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_1639 transport permease protein of gamma-aminobutyrate 0.94 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_11625 GABA permease 0.95 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas sp. RS175 0.81 PFR28_04595 GABA permease 0.95 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Pseudomonas putida KT2440 0.79 PP_0284 gamma-aminobutyrate permease 0.91 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pantoea sp. MT58 0.72 IAI47_19470 GABA permease 0.71 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Escherichia coli ECRC99 0.67 KEDOAH_07235 gabP GABA permease 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC98 0.67 JDDGAC_24565 gabP GABA permease 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 86
Escherichia coli ECRC101 0.67 MCAODC_11425 gabP GABA permease 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli BL21 0.67 ECD_02519 gamma-aminobutyrate transporter 0.71 ECD_03871 phosphomethylpyrimidine synthase low > 61
Escherichia coli ECRC102 0.67 NIAGMN_18670 gabP GABA permease 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC100 0.67 OKFHMN_20905 gabP GABA permease 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 80
Escherichia coli ECOR27 0.67 NOLOHH_12730 gabP GABA permease 0.72 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli BW25113 0.67 b2663 gabP gamma-aminobutyrate transporter (NCBI) 0.72 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS14850 GABA permease 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01069 GABA permease 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECOR38 0.67 HEPCGN_20160 gabP GABA permease 0.71 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia fergusonii Becca 0.67 EFB2_01267 GABA permease 0.72 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECRC62 0.67 BNILDI_11290 gabP GABA permease 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1568 gamma-aminobutyrate (GABA) permease 0.71 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Acinetobacter radioresistens SK82 0.56 MPMX26_01988 GABA permease 0.74 MPMX26_00180 Phosphomethylpyrimidine synthase low > 36
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS31450 amino acid permease 0.75 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS21680 amino acid permease-associated protein 0.75 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Mycobacterium tuberculosis H37Rv 0.40 Rv0522 Probable GABA permease GabP (4-amino butyrate transport carrier) (GAMA-aminobutyrate permease) 0.53 Rv0423c Probable thiamine biosynthesis protein ThiC — —
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS33780 GABA permease 0.71 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Lysobacter sp. OAE881 0.34 ABIE51_RS01430 amino acid permease 0.75 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC low > 62
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01668 gamma-aminobutyrate:proton symporter, AAT family 0.75 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.1650.1 amino acid transporter 0.74 Xcc-8004.1066.1 hypothetical protein low > 74
Ralstonia solanacearum GMI1000 0.29 RS_RS08880 amino acid permease 0.72 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Ralstonia solanacearum PSI07 0.28 RPSI07_RS16340 amino acid permease 0.72 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.09 CA265_RS14990 amino acid transporter 0.74 CA265_RS20165 phosphomethylpyrimidine synthase ThiC low > 88

Not shown: 1 genomes with orthologs for Psyr_4909 only; 56 genomes with orthologs for Psyr_0544 only