Conservation of cofitness between Psyr_3165 and Psyr_0465 in Pseudomonas syringae pv. syringae B728a

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3165 transcriptional regulator, LysR family 1.0 Psyr_0465 HopAN1 protein 0.40 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3165 transcriptional regulator, LysR family 1.00 Psyr_0465 HopAN1 protein low > 86
Pseudomonas fluorescens SBW25 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.83 PFLU_RS11555 four-carbon acid sugar kinase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS07335 LysR family transcriptional regulator 0.83 PFLU_RS11555 four-carbon acid sugar kinase family protein low > 109
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS27430 LysR family transcriptional regulator 0.68 BPHYT_RS29410 HPr kinase low > 109
Paraburkholderia graminis OAS925 0.63 ABIE53_005445 DNA-binding transcriptional LysR family regulator 0.69 ABIE53_005172 uncharacterized protein YgbK (DUF1537 family) low > 113
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS08345 LysR family transcriptional regulator 0.61 ABZR87_RS05250 3-oxo-tetronate kinase low > 80
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS11315 LysR family transcriptional regulator 0.69 QEN71_RS17915 four-carbon acid sugar kinase family protein low > 153
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_03335 transcriptional regulator, LysR family 0.69 H281DRAFT_01509 Uncharacterized conserved protein YgbK, DUF1537 family low > 103
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4371 LysR family transcriptional regulator YbhD 0.56 Ac3H11_3738 FIG00641944: hypothetical protein low > 79
Pantoea sp. MT58 0.55 IAI47_10140 LysR family transcriptional regulator 0.42 IAI47_07145 four-carbon acid sugar kinase family protein low > 76
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS28580 LysR family transcriptional regulator 0.69 RR42_RS10965 membrane protein low > 128
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_4462 LysR family transcriptional regulator YbhD 0.87 Pf1N1B4_5076 FIG00641944: hypothetical protein — —
Pseudomonas sp. RS175 0.47 PFR28_01942 HTH-type transcriptional regulator CynR 0.13 PFR28_02542 3-oxo-isoapionate kinase low > 88
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_28895 LysR family transcriptional regulator 0.13 AO356_22470 type III effector low > 104
Azospirillum brasilense Sp245 0.46 AZOBR_RS28100 LysR family transcriptional regulator 0.14 AZOBR_RS23085 type III effector Hrp-dependent outer protein low > 97
Azospirillum sp. SherDot2 0.46 MPMX19_03557 HTH-type transcriptional regulator CynR 0.12 MPMX19_02974 3-oxo-isoapionate kinase low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF2179 LysR family transcriptional regulator YbhD 0.10 GFF5729 Candidate type III effector Hop protein low > 90
Dickeya dadantii 3937 0.44 DDA3937_RS07805 LysR family transcriptional regulator 0.08 DDA3937_RS17840 four-carbon acid sugar kinase family protein low > 74
Escherichia coli ECOR27 0.41 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.41 NOLOHH_12350 otnK 3-oxo-tetronate kinase low > 75
Escherichia fergusonii Becca 0.41 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.41 EFB2_01175 3-oxo-tetronate kinase low > 86
Escherichia coli ECRC62 0.41 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD 0.41 BNILDI_10900 otnK 3-oxo-tetronate kinase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator 0.41 OHPLBJKB_00996 3-oxo-tetronate kinase low > 73
Escherichia coli BW25113 0.41 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) 0.38 b2737 ygbK hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.41 ECOLIN_RS04090 LysR family transcriptional regulator 0.41 ECOLIN_RS15295 3-oxo-tetronate kinase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS04365 LysR family transcriptional regulator 0.08 BWI76_RS15235 hypothetical protein low > 92
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS07340 LysR family transcriptional regulator 0.68 HSERO_RS21155 HPr kinase low > 78
Bosea sp. OAE506 0.32 ABIE41_RS16550 LysR family transcriptional regulator 0.46 ABIE41_RS21955 3-oxo-tetronate kinase low > 77
Variovorax sp. SCN45 0.31 GFF2416 Transcriptional regulator YbhD, LysR family 0.49 GFF5459 3-oxo-tetronate kinase low > 127
Sinorhizobium meliloti 1021 0.28 SM_b20123 transcriptional regulator 0.37 SM_b20670 hypothetical protein low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF2038 LysR family transcriptional regulator YfeR 0.39 GFF4781 FIG00641944: hypothetical protein low > 78
Serratia liquefaciens MT49 0.28 IAI46_18415 LysR family transcriptional regulator 0.42 IAI46_07600 four-carbon acid sugar kinase family protein low > 86
Variovorax sp. OAS795 0.27 ABID97_RS11710 LysR substrate-binding domain-containing protein 0.51 ABID97_RS01935 3-oxo-tetronate kinase — —
Dickeya dianthicola 67-19 0.25 HGI48_RS00115 LysR family transcriptional regulator 0.07 HGI48_RS17780 four-carbon acid sugar kinase family protein low > 71
Escherichia coli BL21 0.24 ECD_02308 transcriptional regulator of yefH 0.41 ECD_02587 FliA-regulated DUF1537 family protein low > 61

Not shown: 21 genomes with orthologs for Psyr_3165 only; 11 genomes with orthologs for Psyr_0465 only