Conservation of cofitness between Psyr_3113 and Psyr_0033 in Pseudomonas syringae pv. syringae B728a

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3113 N-acylglucosamine 2-epimerase 1.0 Psyr_0033 tryptophan synthase, alpha chain 0.42 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3113 N-acylglucosamine 2-epimerase 1.00 Psyr_0033 tryptophan synthase, alpha chain low > 86
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03400 D-mannose isomerase (EC 5.3.1.7) (from data) 0.81 AO353_10705 tryptophan synthase subunit alpha low > 101
Pseudomonas sp. DMC3 0.67 GFF5148 Sulfoquinovose isomerase 0.82 GFF677 Tryptophan synthase alpha chain 0.51 54
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1893 N-acylglucosamine 2-epimerase (EC 5.1.3.8) 0.81 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas orientalis W4I3 0.65 QF045_RS24285 AGE family epimerase/isomerase 0.82 QF045_RS03115 tryptophan synthase subunit alpha low > 93
Pseudomonas sp. RS175 0.65 PFR28_00565 Sulfoquinovose isomerase 0.80 PFR28_04716 Tryptophan synthase alpha chain — —
Pseudomonas lactucae CFBP13502 0.65 GEMAOFIL_04566 Sulfoquinovose isomerase 0.81 GEMAOFIL_00241 Tryptophan synthase alpha chain low > 96
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_05200 D-mannose isomerase (EC 5.3.1.7) (from data) 0.81 AO356_10910 tryptophan synthase subunit alpha low > 104
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_2894 N-acylglucosamine 2-epimerase (EC 5.1.3.8) 0.80 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.18 74
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_597 D-mannose isomerase (EC 5.3.1.7) (from data) 0.79 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas simiae WCS417 0.64 PS417_22150 D-mannose isomerase (EC 5.3.1.7) (from data) 0.82 PS417_00180 tryptophan synthase subunit alpha low > 88
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS23765 AGE family epimerase/isomerase 0.82 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS23765 AGE family epimerase/isomerase 0.82 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Pseudomonas putida KT2440 0.58 PP_1014 aldose-ketose isomerase 0.90 PP_0082 tryptophan synthase alpha chain low > 96
Pseudomonas sp. BP01 0.54 JOY50_RS11410 AGE family epimerase/isomerase 0.90 JOY50_RS21315 trpA tryptophan synthase subunit alpha low > 84
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4358 N-acyl-D-glucosamine 2-epimerase 0.29 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 76
Escherichia coli ECRC98 0.43 JDDGAC_17660 yihS sulfoquinovose isomerase 0.30 JDDGAC_05220 trpA tryptophan synthase subunit alpha low > 87
Escherichia coli ECRC102 0.43 NIAGMN_11790 yihS sulfoquinovose isomerase 0.30 NIAGMN_26845 trpA tryptophan synthase subunit alpha low > 80
Escherichia coli ECRC99 0.43 KEDOAH_14120 yihS sulfoquinovose isomerase 0.30 KEDOAH_26075 trpA tryptophan synthase subunit alpha — —
Escherichia coli ECRC100 0.43 OKFHMN_14035 yihS sulfoquinovose isomerase 0.30 OKFHMN_02675 trpA tryptophan synthase subunit alpha low > 79
Escherichia coli ECRC101 0.43 MCAODC_04535 yihS sulfoquinovose isomerase 0.30 MCAODC_15590 trpA tryptophan synthase subunit alpha low > 87
Escherichia coli BW25113 0.43 b3880 yihS orf, hypothetical protein (VIMSS) 0.30 b1260 trpA tryptophan synthase subunit alpha (NCBI) low > 76
Escherichia coli ECRC62 0.43 BNILDI_05360 yihS sulfoquinovose isomerase 0.30 BNILDI_18480 trpA tryptophan synthase subunit alpha low > 75
Escherichia coli BL21 0.43 ECD_03765 sulfoquinovose isomerase 0.30 ECD_01234 tryptophan synthase, alpha subunit low > 61
Escherichia coli ECOR27 0.43 NOLOHH_06170 yihS sulfoquinovose isomerase 0.30 NOLOHH_20335 trpA tryptophan synthase subunit alpha low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_04589 Sulfoquinovose isomerase 0.29 MPMX20_02514 Tryptophan synthase alpha chain low > 85
Rahnella sp. WP5 0.42 EX31_RS11935 sulfoquinovose isomerase 0.27 EX31_RS09980 tryptophan synthase subunit alpha low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2235 Aldose-ketose isomerase YihS 0.30 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 78
Escherichia coli ECOR38 0.40 HEPCGN_12670 yihS sulfoquinovose isomerase 0.29 HEPCGN_25515 trpA tryptophan synthase subunit alpha low > 88
Bifidobacterium breve UCC2003 0.36 BBR_RS16325 AGE family epimerase/isomerase 0.27 BBR_RS15810 tryptophan synthase subunit alpha low > 34
Agrobacterium fabrum C58 0.34 Atu2156 hypothetical protein 0.57 Atu0019 tryptophan synthase alpha subunit — —
Rhizobium sp. OAE497 0.33 ABIE40_RS12140 AGE family epimerase/isomerase 0.59 ABIE40_RS19340 tryptophan synthase subunit alpha — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c16670 D-mannose isomerase (EC 5.3.1.7) (from data) 0.61 PGA1_c04930 tryptophan synthase alpha chain — —
Sinorhizobium meliloti 1021 0.21 SMa0058 N-acylglucosamine 2-epimerase 0.59 SMc02765 tryptophan synthase subunit alpha low > 103
Variovorax sp. SCN45 0.19 GFF4772 D-mannose isomerase (EC 5.3.1.7) 0.41 GFF3882 Tryptophan synthase alpha chain (EC 4.2.1.20) — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS00980 AGE family epimerase/isomerase 0.39 QEN71_RS17655 tryptophan synthase subunit alpha low > 153
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3383.1 D-mannose isomerase (EC 5.3.1.7) 0.35 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 74
Paraburkholderia graminis OAS925 0.19 ABIE53_000554 mannose/cellobiose epimerase-like protein (N-acyl-D-glucosamine 2-epimerase family) 0.42 ABIE53_004811 tryptophan synthase alpha chain low > 113
Lysobacter sp. OAE881 0.17 ABIE51_RS02330 AGE family epimerase/isomerase 0.40 ABIE51_RS08265 tryptophan synthase subunit alpha low > 62
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS11110 AGE family epimerase/isomerase 0.41 ABZR86_RS07995 tryptophan synthase subunit alpha low > 74

Not shown: 0 genomes with orthologs for Psyr_3113 only; 82 genomes with orthologs for Psyr_0033 only