Conservation of cofitness between PfGW456L13_5069 and PfGW456L13_3250 in Pseudomonas fluorescens GW456-L13

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens GW456-L13 1.0 PfGW456L13_5069 Iron-uptake factor PiuC 1.0 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) 0.34 9
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_1140 Iron-uptake factor PiuC 0.95 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_05455 Fe(II)-dependent oxygenase 0.93 AO353_23750 glycogen debranching protein low > 101
Pseudomonas sp. RS175 0.94 PFR28_00111 PKHD-type hydroxylase 0.94 PFR28_02150 Glycogen operon protein GlgX low > 88
Pseudomonas simiae WCS417 0.92 PS417_03995 Fe(II)-dependent oxygenase 0.89 PS417_14505 glycogen debranching protein low > 88
Pseudomonas putida KT2440 0.84 PP_0862 PKHD-type hydroxylase PP_0862 0.83 PP_4055 Glycogen debranching enzyme low > 96
Pseudomonas stutzeri RCH2 0.77 Psest_3348 Uncharacterized iron-regulated protein 0.82 Psest_2167 glycogen debranching enzyme GlgX low > 67
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.1693.1 Iron-uptake factor PiuC 0.61 Xcc-8004.544.1 Glycogen debranching enzyme (EC 3.2.1.-) low > 74
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS06175 Fe2+-dependent dioxygenase 0.52 ABZR87_RS17210 glycogen debranching protein GlgX low > 80
Variovorax sp. SCN45 0.56 GFF2833 PKHD-type hydroxylase YbiX 0.55 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) low > 127
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS35160 PKHD-type hydroxylase 0.69 BPHYT_RS26285 glycogen debranching protein low > 109
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS16290 Fe(II)-dependent oxygenase 0.50 HSERO_RS12505 glycogen debranching protein low > 78
Alteromonas macleodii MIT1002 0.55 MIT1002_03724 PKHD-type hydroxylase 0.36 MIT1002_02398 Glycogen debranching enzyme low > 70
Paraburkholderia graminis OAS925 0.54 ABIE53_000375 PKHD-type hydroxylase 0.69 ABIE53_005979 isoamylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_02287 PKHD-type hydroxylase 0.69 H281DRAFT_02812 glycogen operon protein low > 103
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS10170 Fe2+-dependent dioxygenase 0.68 QEN71_RS10560 glycogen debranching protein GlgX low > 153
Shewanella sp. ANA-3 0.52 Shewana3_0717 putative hydroxylase (RefSeq) 0.47 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) low > 73
Rhodopseudomonas palustris CGA009 0.51 TX73_018005 Fe2+-dependent dioxygenase 0.62 TX73_017120 glycogen debranching protein GlgX low > 86
Azospirillum sp. SherDot2 0.51 MPMX19_02864 PKHD-type hydroxylase 0.71 MPMX19_04929 Glycogen operon protein GlgX low > 112
Variovorax sp. OAS795 0.51 ABID97_RS10780 Fe2+-dependent dioxygenase 0.55 ABID97_RS12155 glycogen debranching protein GlgX low > 91
Shewanella oneidensis MR-1 0.51 SO3913 conserved hypothetical protein (NCBI ptt file) 0.46 SO1495 glgX glycogen operon protein (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.51 AZOBR_RS19075 Fe(II)-dependent oxygenase 0.70 AZOBR_RS19445 glycogen debranching protein low > 97
Escherichia coli Nissle 1917 0.48 ECOLIN_RS04280 PKHD-type hydroxylase YbiX 0.37 ECOLIN_RS19635 glycogen debranching protein GlgX — —
Escherichia coli BW25113 0.48 b0804 ybiX putative enzyme (VIMSS) 0.37 b3431 glgX glycogen debranching enzyme (NCBI) low > 76
Escherichia coli BL21 0.48 ECD_00771 Fe(II)-dependent oxygenase superfamily protein 0.37 ECD_03283 glycogen debranching enzyme low > 61
Escherichia fergusonii Becca 0.48 EFB2_03301 PKHD-type hydroxylase 0.37 EFB2_00388 Glycogen debranching enzyme low > 86
Escherichia coli ECOR27 0.48 NOLOHH_22595 PKHD-type hydroxylase YbiX 0.37 NOLOHH_08680 glgX glycogen debranching protein GlgX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_02909 PKHD-type hydroxylase 0.37 OHPLBJKB_00270 Glycogen debranching enzyme low > 73
Escherichia coli ECRC62 0.48 BNILDI_20875 PKHD-type hydroxylase YbiX 0.37 BNILDI_02835 glgX glycogen debranching protein GlgX low > 75
Escherichia coli ECOR38 0.47 HEPCGN_01795 PKHD-type hydroxylase YbiX 0.37 HEPCGN_15705 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC100 0.47 OKFHMN_06245 PKHD-type hydroxylase YbiX 0.37 OKFHMN_16890 glgX glycogen debranching protein GlgX low > 80
Escherichia coli ECRC101 0.47 MCAODC_25460 PKHD-type hydroxylase YbiX 0.37 MCAODC_07420 glgX glycogen debranching protein GlgX low > 87
Escherichia coli ECRC98 0.47 JDDGAC_09880 PKHD-type hydroxylase YbiX 0.37 JDDGAC_20520 glgX glycogen debranching protein GlgX low > 86
Escherichia coli ECRC102 0.47 NIAGMN_04290 PKHD-type hydroxylase YbiX 0.37 NIAGMN_14660 glgX glycogen debranching protein GlgX — —
Escherichia coli ECRC99 0.47 KEDOAH_21665 PKHD-type hydroxylase YbiX 0.37 KEDOAH_11250 glgX glycogen debranching protein GlgX — —
Klebsiella michiganensis M5al 0.46 BWI76_RS08940 PKHD-type hydroxylase 0.53 BWI76_RS14140 glycogen debranching enzyme low > 92
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_0015 putative hydroxylase 0.33 Synpcc7942_0086 glgX isoamylase. Glycosyl Hydrolase family 13. low > 38

Not shown: 16 genomes with orthologs for PfGW456L13_5069 only; 36 genomes with orthologs for PfGW456L13_3250 only