Conservation of cofitness between Pf1N1B4_3500 and Pf1N1B4_3768 in Pseudomonas fluorescens FW300-N1B4

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3500 D-lactate dehydrogenase (EC 1.1.1.28) 1.0 Pf1N1B4_3768 Homoserine/homoserine lactone efflux protein 0.26 6
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_02740 hydroxyacid dehydrogenase 0.89 AO353_02310 lysine transporter LysE low > 101
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_2028 D-lactate dehydrogenase (EC 1.1.1.28) 0.89 PfGW456L13_4178 Homoserine/homoserine lactone efflux protein low > 87
Pseudomonas simiae WCS417 0.88 PS417_16375 2-hydroxyacid dehydrogenase 0.83 PS417_19400 amino acid transporter LysE low > 88
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.84 PFLU_RS21370 LysE family translocator low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS18415 2-hydroxyacid dehydrogenase 0.84 PFLU_RS21370 LysE family translocator low > 109
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_19040 hydroxyacid dehydrogenase 0.84 AO356_19480 lysine transporter LysE low > 104
Pseudomonas sp. RS175 0.86 PFR28_03228 D-lactate dehydrogenase 0.88 PFR28_03138 Homoserine/homoserine lactone efflux protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5719 D-lactate dehydrogenase (EC 1.1.1.28) 0.90 Pf6N2E2_5810 Homoserine/homoserine lactone efflux protein low > 103
Pseudomonas stutzeri RCH2 0.74 Psest_4064 Lactate dehydrogenase and related dehydrogenases 0.76 Psest_1202 Putative threonine efflux protein low > 67
Ralstonia solanacearum UW163 0.69 UW163_RS05795 2-hydroxyacid dehydrogenase 0.25 UW163_RS03240 LysE family translocator — —
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS07830 2-hydroxyacid dehydrogenase 0.25 RALBFv3_RS10340 LysE family translocator low > 76
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_04746 D-lactate dehydrogenase 0.34 H281DRAFT_05836 Threonine/homoserine/homoserine lactone efflux protein low > 103
Paraburkholderia graminis OAS925 0.66 ABIE53_000908 D-lactate dehydrogenase 0.31 ABIE53_000024 threonine/homoserine/homoserine lactone efflux protein low > 113
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS03835 D-lactate dehydrogenase 0.34 BPHYT_RS18360 amino acid transporter low > 109
Ralstonia solanacearum GMI1000 0.66 RS_RS15730 2-hydroxyacid dehydrogenase 0.23 RS_RS01135 LysE family translocator low > 80
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS26130 2-hydroxyacid dehydrogenase 0.32 QEN71_RS28505 LysE family translocator 0.34 73
Agrobacterium fabrum C58 0.58 Atu3870 D-lactate dehydrogenase 0.30 Atu1864 putative homoserine/homoserine lactone efflux protein low > 89
Shewanella sp. ANA-3 0.57 Shewana3_3319 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.35 Shewana3_0118 lysine exporter protein LysE/YggA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.55 SO0968 ldhA D-lactate dehydrogenase (NCBI ptt file) 0.35 SO0122 transporter, LysE family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0612 D-lactate dehydrogenase (RefSeq) 0.27 Sama_3631 amino acid transporter LysE (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) 0.30 Shew_3751 lysine exporter protein LysE/YggA (RefSeq) low > 60
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_0219 Lactate dehydrogenase and related dehydrogenases 0.32 Ga0059261_2038 Putative threonine efflux protein low > 68
Pectobacterium carotovorum WPP14 0.48 HER17_RS09630 2-hydroxyacid dehydrogenase 0.36 HER17_RS17550 LysE family transporter low > 75

Not shown: 40 genomes with orthologs for Pf1N1B4_3500 only; 5 genomes with orthologs for Pf1N1B4_3768 only