Conservation of cofitness between Pf1N1B4_2728 and Pf1N1B4_2468 in Pseudomonas fluorescens FW300-N1B4

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2728 ATP-dependent helicase HrpB 1.0 Pf1N1B4_2468 Inner membrane protein CreD 0.27 8
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1395 ATP-dependent helicase HrpB 0.80 PfGW456L13_1129 Inner membrane protein CreD low > 87
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.64 Pf6N2E2_4740 Inner membrane protein CreD low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_15485 ATP-dependent helicase 0.66 AO356_14045 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_06300 ATP-dependent helicase 0.76 AO353_07585 hypothetical protein low > 101
Pseudomonas sp. RS175 0.91 PFR28_03833 ATP-dependent RNA helicase HrpB 0.66 PFR28_04121 Inner membrane protein CreD low > 88
Pseudomonas simiae WCS417 0.89 PS417_24550 ATP-dependent helicase 0.69 PS417_26130 membrane protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS26480 ATP-dependent helicase HrpB 0.69 PFLU_RS27760 cell envelope integrity protein CreD 0.16 2
Pseudomonas fluorescens SBW25 0.88 PFLU_RS26480 ATP-dependent helicase HrpB 0.69 PFLU_RS27760 cell envelope integrity protein CreD low > 109
Pseudomonas sp. S08-1 0.79 OH686_08800 ATP-dependent helicase HrpB 0.64 OH686_14840 Inner membrane protein CreD low > 80
Magnetospirillum magneticum AMB-1 0.46 AMB_RS06395 ATP-dependent helicase HrpB 0.19 AMB_RS09325 cell envelope integrity protein CreD — —
Azospirillum sp. SherDot2 0.45 MPMX19_00095 ATP-dependent RNA helicase HrpB 0.19 MPMX19_04595 Inner membrane protein CreD low > 112
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_3452 ATP-dependent helicase HrpB 0.31 Echvi_1437 Inner membrane protein involved in colicin E2 resistance low > 79
Enterobacter asburiae PDN3 0.39 EX28DRAFT_3737 ATP-dependent helicase HrpB 0.31 EX28DRAFT_3610 Inner membrane protein involved in colicin E2 resistance low > 76
Shewanella oneidensis MR-1 0.38 SO0632 hrpB ATP-dependent helicase HrpB (NCBI ptt file) 0.24 SO4334 inner membrane protein, putative (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF84 ATP-dependent helicase HrpB 0.32 GFF1068 Inner membrane protein CreD low > 78
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.354.1 macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. 0.29 Xcc-8004.1783.1 Inner membrane protein CreD low > 74
Enterobacter sp. TBS_079 0.38 MPMX20_00834 ATP-dependent RNA helicase HrpB 0.31 MPMX20_00707 Inner membrane protein CreD low > 85
Klebsiella michiganensis M5al 0.38 BWI76_RS05030 ATP-dependent helicase 0.29 BWI76_RS04225 cell envelope integrity protein CreD low > 92
Shewanella sp. ANA-3 0.37 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.24 Shewana3_0365 hypothetical protein (RefSeq) low > 73
Escherichia fergusonii Becca 0.37 EFB2_03896 ATP-dependent RNA helicase HrpB 0.31 EFB2_04044 Inner membrane protein CreD low > 86
Escherichia coli BW25113 0.37 b0148 hrpB helicase, ATP-dependent (VIMSS) 0.30 b4400 creD inner membrane protein (NCBI) low > 76
Escherichia coli ECRC100 0.37 OKFHMN_10330 hrpB ATP-dependent helicase HrpB 0.31 OKFHMN_11130 creD cell envelope integrity protein CreD low > 80
Escherichia coli ECRC99 0.37 KEDOAH_17825 hrpB ATP-dependent helicase HrpB 0.31 KEDOAH_17025 creD cell envelope integrity protein CreD — —
Escherichia coli ECRC102 0.37 NIAGMN_08180 hrpB ATP-dependent helicase HrpB 0.31 NIAGMN_08980 creD cell envelope integrity protein CreD — —
Escherichia coli ECRC98 0.37 JDDGAC_13925 hrpB ATP-dependent helicase HrpB 0.31 JDDGAC_14725 creD cell envelope integrity protein CreD low > 86
Escherichia coli ECRC101 0.37 MCAODC_00845 hrpB ATP-dependent helicase HrpB 0.31 MCAODC_01645 creD cell envelope integrity protein CreD low > 87
Escherichia coli ECOR38 0.37 HEPCGN_08280 hrpB ATP-dependent helicase HrpB 0.31 HEPCGN_09135 creD cell envelope integrity protein CreD low > 87
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00830 ATP-dependent helicase HrpB 0.31 ECOLIN_RS25250 cell envelope integrity protein CreD low > 55
Escherichia coli ECRC62 0.37 BNILDI_08995 hrpB ATP-dependent helicase HrpB 0.31 BNILDI_08140 creD cell envelope integrity protein CreD low > 75
Escherichia coli BL21 0.37 ECD_00147 putative ATP-dependent helicase 0.31 ECD_04276 inner membrane protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03514 hypothetical protein 0.32 OHPLBJKB_03661 Inner membrane protein CreD low > 73
Agrobacterium fabrum C58 0.37 Atu0052 helicase 0.20 Atu1155 hypothetical protein low > 89
Escherichia coli ECOR27 0.37 NOLOHH_02675 hrpB ATP-dependent helicase HrpB 0.31 NOLOHH_03460 creD cell envelope integrity protein CreD low > 75
Lysobacter sp. OAE881 0.37 ABIE51_RS00675 ATP-dependent helicase HrpB 0.33 ABIE51_RS14270 cell envelope integrity protein CreD low > 62
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_16270 hrpA HrpA-like RNA helicase 0.28 OKGIIK_02215 creD cell envelope integrity protein CreD low > 52
Rhodanobacter denitrificans MT42 0.37 LRK55_RS09655 ATP-dependent helicase HrpB 0.28 LRK55_RS12515 cell envelope integrity protein CreD low > 63
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS10015 ATP-dependent helicase HrpB 0.28 LRK54_RS12815 cell envelope integrity protein CreD low > 59
Serratia liquefaciens MT49 0.36 IAI46_21195 ATP-dependent helicase HrpB 0.37 IAI46_20740 cell envelope integrity protein CreD low > 86
Shewanella loihica PV-4 0.36 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.23 Shew_0303 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.34 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.21 Sama_3274 hypothetical protein (RefSeq) low > 62

Not shown: 28 genomes with orthologs for Pf1N1B4_2728 only; 9 genomes with orthologs for Pf1N1B4_2468 only