Conservation of cofitness between PP_5085 and PP_5095 in Pseudomonas putida KT2440

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5085 malic enzyme B 1.0 PP_5095 pyrroline-5-carboxylate reductase 0.34 17
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1545 NADP-dependent malic enzyme (EC 1.1.1.40) 0.84 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_09425 malate dehydrogenase 0.85 AO356_13420 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3762 NADP-dependent malic enzyme (EC 1.1.1.40) 0.84 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) — —
Pseudomonas stutzeri RCH2 0.92 Psest_3721 Malic enzyme 0.77 Psest_0283 pyrroline-5-carboxylate reductase — —
Pseudomonas sp. RS175 0.92 PFR28_05005 NADP-dependent malic enzyme 0.86 PFR28_04243 Pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_283 NADP-dependent malic enzyme (EC 1.1.1.40) 0.84 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_12460 malate dehydrogenase 0.85 AO353_08165 pyrroline-5-carboxylate reductase low > 101
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.75 Psyr_0476 pyrroline-5-carboxylate reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.75 Psyr_0476 pyrroline-5-carboxylate reductase low > 86
Pseudomonas fluorescens SBW25 0.91 PFLU_RS01995 malate dehydrogenase 0.82 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS01995 malate dehydrogenase 0.82 PFLU_RS28375 pyrroline-5-carboxylate reductase — —
Pseudomonas simiae WCS417 0.90 PS417_01950 malate dehydrogenase 0.82 PS417_26730 pyrroline-5-carboxylate reductase low > 88
Pseudomonas sp. S08-1 0.88 OH686_10060 NADP-dependent malic enzyme 0.79 OH686_10980 pyrroline-5-carboxylate reductase low > 80
Marinobacter adhaerens HP15 0.75 HP15_472 malate dehydrogenase (oxaloacetate-decarboxylating), NADP(+) 0.42 HP15_287 pyrroline-5-carboxylate reductase 0.43 41
Alteromonas macleodii MIT1002 0.69 MIT1002_03668 NADP-dependent malic enzyme 0.39 MIT1002_03062 Pyrroline-5-carboxylate reductase low > 70
Shewanella loihica PV-4 0.66 Shew_0383 malate dehydrogenase (RefSeq) 0.37 Shew_1136 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 60
Shewanella amazonensis SB2B 0.66 Sama_0448 malate dehydrogenase (RefSeq) 0.37 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO4118 malate oxidoreductase, putative (NCBI ptt file) 0.38 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_3669 malic enzyme, NAD-binding (RefSeq) 0.37 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13540 malate dehydrogenase 0.38 CSW01_02450 pyrroline-5-carboxylate reductase low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.56 DVU0414 tme NADP-dependent malic enzyme-related protein (TIGR) 0.28 DVU2332 proC pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 55
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_1539 Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) (RefSeq) 0.23 DvMF_3161 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) low > 51
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_1297 Malate dehydrogenase (oxaloacetate decarboxylating) 0.29 Synpcc7942_2058 proC pyrroline-5-carboxylate reductase — —
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0593 Malic enzyme 0.39 B158DRAFT_0197 pyrroline-5-carboxylate reductase low > 40

Not shown: 0 genomes with orthologs for PP_5085 only; 74 genomes with orthologs for PP_5095 only