Conservation of cofitness between PP_2402 and PP_4895 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2402 putative Sensor histidine kinase 1.0 PP_4895 tRNA dimethylallyltransferase 0.37 8
Pseudomonas sp. RS175 0.70 PFR28_01762 Sensor histidine kinase RcsC 0.79 PFR28_05120 tRNA dimethylallyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_658 sensor histidine kinase 0.79 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_24845 ATPase 0.79 AO356_08660 tRNA dimethylallyltransferase 0.30 86
Pseudomonas sp. S08-1 0.67 OH686_23170 Two-component system sensor histidine kinase 0.72 OH686_09475 tRNA dimethylallyltransferase — —
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_3795 sensor histidine kinase 0.79 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 87
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_4299 sensor histidine kinase 0.79 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Pseudomonas simiae WCS417 0.62 PS417_16005 ATPase 0.77 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS17820 HAMP domain-containing histidine kinase 0.77 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS17820 HAMP domain-containing histidine kinase 0.77 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Sinorhizobium meliloti 1021 0.55 SM_b20218 sensor histidine kinase 0.26 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Azospirillum sp. SherDot2 0.52 MPMX19_03221 Adaptive-response sensory-kinase SasA 0.21 MPMX19_01778 tRNA dimethylallyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS21020 ATP-binding protein 0.50 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS22865 ATPase 0.46 BPHYT_RS03645 tRNA dimethylallyltransferase low > 109
Pantoea sp. MT58 0.49 IAI47_19360 HAMP domain-containing protein 0.57 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS16960 HAMP domain-containing sensor histidine kinase 0.49 ABZR87_RS00875 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.42 74
Paraburkholderia graminis OAS925 0.48 ABIE53_004227 signal transduction histidine kinase 0.49 ABIE53_000875 tRNA dimethylallyltransferase low > 113
Enterobacter sp. TBS_079 0.48 MPMX20_02282 Sensor histidine kinase RcsC 0.58 MPMX20_00452 tRNA dimethylallyltransferase low > 85
Lysobacter sp. OAE881 0.48 ABIE51_RS11160 HAMP domain-containing sensor histidine kinase 0.46 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 62
Variovorax sp. SCN45 0.48 GFF6862 Two-component system sensor histidine kinase 0.46 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_03072 Signal transduction histidine kinase 0.48 H281DRAFT_04711 tRNA dimethylallyltransferase — —
Variovorax sp. OAS795 0.47 ABID97_RS24170 ATP-binding protein 0.46 ABID97_RS20320 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Rhizobium sp. OAE497 0.47 ABIE40_RS24310 HAMP domain-containing sensor histidine kinase 0.28 ABIE40_RS11505 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS21425 HAMP domain-containing sensor histidine kinase 0.49 QEN71_RS26440 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1184 Signal transduction histidine kinase 0.58 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Acidovorax sp. GW101-3H11 0.36 Ac3H11_4244 sensor histidine kinase 0.46 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 79
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS07630 histidine kinase 0.50 HSERO_RS04185 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10320 HAMP domain-containing sensor histidine kinase 0.21 A4249_RS05030 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Dinoroseobacter shibae DFL-12 0.22 Dshi_4049 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.18 Dshi_1492 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —

Not shown: 1 genomes with orthologs for PP_2402 only; 72 genomes with orthologs for PP_4895 only