Conservation of cofitness between PP_3926 and PP_3925 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3926 short-chain dehydrogenase 1.0 PP_3925 conserved protein of unknown function 0.21 1
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_3499 Short-chain dehydrogenase/reductase SDR 0.84 PfGW456L13_3498 Predicted aminoglycoside phosphotransferase low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_21495 short-chain dehydrogenase 0.84 AO353_21500 aminoglycoside phosphotransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_23325 short-chain dehydrogenase 0.83 AO356_23330 aminoglycoside phosphotransferase low > 104
Pseudomonas sp. RS175 0.93 PFR28_02397 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.84 PFR28_02396 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_544 Short-chain dehydrogenase/reductase SDR 0.84 Pf6N2E2_545 Predicted aminoglycoside phosphotransferase low > 103
Pseudomonas fluorescens SBW25 0.93 PFLU_RS17045 SDR family oxidoreductase 0.85 PFLU_RS17040 phosphotransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS17045 SDR family oxidoreductase 0.85 PFLU_RS17040 phosphotransferase family protein low > 109
Pseudomonas simiae WCS417 0.93 PS417_15030 short-chain dehydrogenase 0.86 PS417_15025 aminoglycoside phosphotransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_4527 Short-chain dehydrogenase/reductase SDR 0.83 Pf1N1B4_4528 Predicted aminoglycoside phosphotransferase low > 87
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.81 Psyr_2457 Aminoglycoside phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2456 Short-chain dehydrogenase/reductase SDR 0.81 Psyr_2457 Aminoglycoside phosphotransferase — —
Pseudomonas sp. S08-1 0.88 OH686_03515 Oxidoreductase, short-chain dehydrogenase/reductase family 0.84 OH686_03510 acyl-CoA dehydrogenase, putative phosphotransferase low > 80
Pseudomonas stutzeri RCH2 0.87 Psest_2081 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.78 Psest_2082 Predicted aminoglycoside phosphotransferase low > 67
Alteromonas macleodii MIT1002 0.68 MIT1002_02274 3-oxoacyl-[acyl-carrier-protein] reductase FabG 0.47 MIT1002_02747 thiamine kinase 0.45 41
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS21160 SDR family oxidoreductase 0.24 QEN71_RS21165 phosphotransferase low > 153
Marinobacter adhaerens HP15 0.67 HP15_825 short-chain dehydrogenase/reductase SDR 0.58 HP15_823 phosphotransferase enzyme family protein low > 73
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS21885 SDR family oxidoreductase 0.25 ABZR87_RS14670 phosphotransferase low > 80
Shewanella loihica PV-4 0.65 Shew_2862 short chain dehydrogenase (RefSeq) 0.26 Shew_2861 aminoglycoside phosphotransferase (RefSeq) low > 60
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_0844 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.27 Ga0059261_0845 Predicted aminoglycoside phosphotransferase low > 68
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28985 short-chain dehydrogenase 0.25 RR42_RS05745 aminoglycoside phosphotransferase low > 128
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS02235 SDR family oxidoreductase 0.25 A4249_RS13265 phosphotransferase family protein low > 48
Rhodopseudomonas palustris CGA009 0.32 TX73_016985 SDR family oxidoreductase 0.26 TX73_017000 phosphotransferase family protein low > 86
Mycobacterium tuberculosis H37Rv 0.31 Rv1928c Probable short-chain type dehydrogenase/reductase 0.23 Rv3761c Possible acyl-CoA dehydrogenase FadE36 low > 58
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3445 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.22 Ac3H11_1052 Predicted aminoglycoside phosphotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF1559 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.23 GFF4494 Predicted aminoglycoside phosphotransferase low > 90
Variovorax sp. SCN45 0.29 GFF4970 Oxidoreductase, short-chain dehydrogenase/reductase family 0.22 GFF364 acyl-CoA dehydrogenase, putative phosphotransferase low > 127
Variovorax sp. OAS795 0.28 ABID97_RS15765 SDR family oxidoreductase 0.26 ABID97_RS11575 phosphotransferase low > 91
Dinoroseobacter shibae DFL-12 0.27 Dshi_2239 short-chain dehydrogenase/reductase SDR (RefSeq) 0.19 Dshi_1003 aminoglycoside phosphotransferase (RefSeq) low > 64

Not shown: 10 genomes with orthologs for PP_3926 only; 12 genomes with orthologs for PP_3925 only