Conservation of cofitness between PP_4897 and PP_2714 in Pseudomonas putida KT2440

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4897 N-acetylmuramoyl-L-alanine amidase 1.0 PP_2714 Sensor histidine kinase 0.30 2
Pseudomonas sp. RS175 0.81 PFR28_05118 N-acetylmuramoyl-L-alanine amidase AmiC 0.54 PFR28_02327 Adaptive-response sensory-kinase SasA low > 88
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_08670 N-acetylmuramoyl-L-alanine amidase 0.55 AO356_23850 histidine kinase low > 104
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_0569 N-acetylmuramoyl-L-alanine amidase 0.47 Psyr_3512 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_0569 N-acetylmuramoyl-L-alanine amidase 0.47 Psyr_3512 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal low > 86
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_157 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.57 PfGW456L13_3168 Sensory histidine kinase QseC low > 87
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS02555 AMIN domain-containing protein 0.57 PFLU_RS15250 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS02555 AMIN domain-containing protein 0.57 PFLU_RS15250 HAMP domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_1415 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.52 Pf1N1B4_4453 Sensory histidine kinase QseC — —
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_3617 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.55 Pf6N2E2_1538 Sensory histidine kinase QseC low > 103
Pseudomonas simiae WCS417 0.78 PS417_02475 N-acetylmuramoyl-L-alanine amidase 0.55 PS417_13590 histidine kinase low > 88
Pseudomonas stutzeri RCH2 0.70 Psest_0680 N-acetylmuramoyl-L-alanine amidase 0.33 Psest_3477 Signal transduction histidine kinase — —
Pseudomonas sp. S08-1 0.69 OH686_09485 N-acetylmuramoyl-L-alanine amidase 0.54 OH686_04660 hypothetical protein low > 80
Marinobacter adhaerens HP15 0.48 HP15_2502 N-acetylmuramoyl-L-alanine amidase-like protein 0.20 HP15_3967 integral membrane sensor signal transduction histidine kinase low > 73
Shewanella oneidensis MR-1 0.38 SO0600 amiB N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) 0.20 SO2105 sensor protein YgiY, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.37 Shewana3_0594 cell wall hydrolase/autolysin (RefSeq) 0.21 Shewana3_1886 ATPase domain-containing protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.36 MIT1002_03791 N-acetylmuramoyl-L-alanine amidase AmiB precursor 0.18 MIT1002_00809 Sensor protein QseC low > 70
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS05110 N-acetylmuramoyl-L-alanine amidase 0.21 RALBFv3_RS16420 two-component sensor histidine kinase low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS08515 N-acetylmuramoyl-L-alanine amidase 0.21 UW163_RS17160 two-component sensor histidine kinase — —
Dechlorosoma suillum PS 0.33 Dsui_3500 N-acetylmuramoyl-L-alanine amidase 0.24 Dsui_2249 signal transduction histidine kinase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS00765 N-acetylmuramoyl-L-alanine amidase 0.20 ABZR87_RS22885 ATP-binding protein low > 80
Pectobacterium carotovorum WPP14 0.32 HER17_RS16500 N-acetylmuramoyl-L-alanine amidase AmiC 0.19 HER17_RS21565 two-component system sensor histidine kinase QseC low > 75
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_03915 N-acetylmuramoyl-L-alanine amidase 0.19 OKGIIK_14055 Sensor protein QseC — —
Dickeya dianthicola 67-19 0.31 HGI48_RS18560 N-acetylmuramoyl-L-alanine amidase AmiB 0.18 HGI48_RS21350 two-component system sensor histidine kinase QseC low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS19695 N-acetylmuramoyl-L-alanine amidase AmiB 0.18 DZA65_RS22330 two-component system sensor histidine kinase QseC low > 75
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS15145 N-acetylmuramoyl-L-alanine amidase 0.21 LRK54_RS07605 ATP-binding protein — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS14860 N-acetylmuramoyl-L-alanine amidase 0.21 LRK55_RS07345 ATP-binding protein — —
Serratia liquefaciens MT49 0.31 IAI46_20390 N-acetylmuramoyl-L-alanine amidase 0.19 IAI46_21230 two-component system sensor histidine kinase QseC low > 86
Pantoea sp. MT58 0.30 IAI47_02575 N-acetylmuramoyl-L-alanine amidase AmiB 0.19 IAI47_00335 two-component system sensor histidine kinase QseC low > 76
Rahnella sp. WP5 0.28 EX31_RS08835 N-acetylmuramoyl-L-alanine amidase AmiB 0.19 EX31_RS03270 two-component system sensor histidine kinase QseC low > 89

Not shown: 33 genomes with orthologs for PP_4897 only; 5 genomes with orthologs for PP_2714 only