Conservation of cofitness between PP_1076 and PP_1871 in Pseudomonas putida KT2440

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1076 aquaglyceroporin 1.0 PP_1871 Protease HtpX 0.46 19
Pseudomonas simiae WCS417 0.85 PS417_05580 glycerol uptake facilitator GlpF 0.89 PS417_08555 protease HtpX — —
Pseudomonas fluorescens SBW25 0.85 PFLU_RS05665 aquaporin 0.89 PFLU_RS08505 protease HtpX low > 109
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS05665 aquaporin 0.89 PFLU_RS08505 protease HtpX low > 109
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_1735 Glycerol uptake facilitator protein 0.92 PfGW456L13_2250 Probable protease htpX homolog (EC 3.4.24.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_5575 Glycerol uptake facilitator protein 0.93 Pf6N2E2_2447 Probable protease htpX homolog (EC 3.4.24.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_04175 glycerol uptake facilitator GlpF 0.92 AO353_19145 protease HtpX low > 101
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_18255 glycerol uptake facilitator GlpF 0.93 AO356_03095 protease HtpX low > 104
Pseudomonas sp. RS175 0.81 PFR28_03367 Glycerol uptake facilitator protein 0.93 PFR28_00983 Protease HtpX low > 88
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_3904 Major intrinsic protein 0.91 Psyr_3616 Heat shock protein, Metallo peptidase, MEROPS family M48B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_3904 Major intrinsic protein 0.91 Psyr_3616 Heat shock protein, Metallo peptidase, MEROPS family M48B low > 86
Pseudomonas fluorescens FW300-N1B4 0.78 Pf1N1B4_766 Glycerol uptake facilitator protein 0.92 Pf1N1B4_262 Probable protease htpX homolog (EC 3.4.24.-) — —
Pseudomonas stutzeri RCH2 0.73 Psest_2772 MIP family channel proteins 0.86 Psest_1770 Zn-dependent protease with chaperone function — —
Pectobacterium carotovorum WPP14 0.69 HER17_RS00830 aquaporin family protein 0.45 HER17_RS11545 protease HtpX low > 75
Pantoea sp. MT58 0.69 IAI47_00830 aquaporin family protein 0.45 IAI47_08710 protease HtpX low > 76
Serratia liquefaciens MT49 0.69 IAI46_24595 aquaporin 0.46 IAI46_10810 protease HtpX — —
Enterobacter asburiae PDN3 0.69 EX28DRAFT_4400 MIP family channel proteins 0.46 EX28DRAFT_0727 Zn-dependent protease with chaperone function low > 76
Escherichia coli ECRC99 0.68 KEDOAH_14390 glpF glycerol uptake facilitator protein GlpF 0.45 KEDOAH_01635 htpX protease HtpX — —
Escherichia coli BW25113 0.68 b3927 glpF glycerol facilitator (NCBI) 0.45 b1829 htpX heat shock protein HtpX (NCBI) low > 76
Escherichia coli ECRC101 0.68 MCAODC_04270 glpF glycerol uptake facilitator protein GlpF 0.45 MCAODC_18935 htpX protease HtpX — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2308 Glycerol uptake facilitator protein 0.46 GFF2844 Probable protease HtpX (EC 3.4.24.-) — —
Escherichia coli ECRC98 0.68 JDDGAC_17395 glpF glycerol uptake facilitator protein GlpF 0.45 JDDGAC_01045 htpX protease HtpX — —
Escherichia coli ECRC102 0.68 NIAGMN_11525 glpF glycerol uptake facilitator protein GlpF 0.45 NIAGMN_01590 htpX protease HtpX — —
Escherichia coli ECRC101 0.68 OKFHMN_13770 glpF glycerol uptake facilitator protein GlpF 0.45 OKFHMN_26470 htpX protease HtpX — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS22615 glycerol uptake facilitator protein GlpF 0.45 ECOLIN_RS10185 protease HtpX — —
Escherichia coli ECRC62 0.68 BNILDI_05625 glpF glycerol uptake facilitator protein GlpF 0.45 BNILDI_15775 htpX protease HtpX — —
Escherichia coli ECOR27 0.68 NOLOHH_05905 glpF glycerol uptake facilitator protein GlpF 0.45 NOLOHH_16980 htpX protease HtpX — —
Escherichia coli BL21 0.68 ECD_03812 glycerol facilitator 0.45 ECD_01800 putative endopeptidase low > 60
Escherichia fergusonii Becca 0.68 EFB2_04691 Glycerol uptake facilitator protein 0.45 EFB2_02172 Protease HtpX low > 86
Escherichia coli ECOR38 0.68 HEPCGN_12415 glpF glycerol uptake facilitator protein GlpF 0.45 HEPCGN_04870 htpX protease HtpX low > 85
Enterobacter sp. TBS_079 0.68 MPMX20_04542 Glycerol uptake facilitator protein 0.45 MPMX20_02736 Protease HtpX low > 85
Rahnella sp. WP5 0.68 EX31_RS14265 aquaporin family protein 0.45 EX31_RS24885 protease HtpX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_04124 Glycerol uptake facilitator protein 0.45 OHPLBJKB_01902 Protease HtpX low > 73
Klebsiella michiganensis M5al 0.68 BWI76_RS27510 aquaporin 0.45 BWI76_RS17970 zinc metalloprotease HtpX low > 92
Dickeya dianthicola 67-19 0.68 HGI48_RS20480 aquaporin family protein 0.46 HGI48_RS11505 protease HtpX low > 71
Dickeya dianthicola ME23 0.67 DZA65_RS21525 aquaporin family protein 0.46 DZA65_RS11840 protease HtpX low > 75
Erwinia tracheiphila SCR3 0.66 LU632_RS19700 aquaporin family protein 0.42 LU632_RS13240 htpX protease HtpX — —
Dickeya dadantii 3937 0.63 DDA3937_RS00895 aquaporin 0.46 DDA3937_RS11460 protease HtpX low > 74
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_17905 aquaporin family protein 0.44 CSW01_05670 protease HtpX low > 62
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS20030 MIP/aquaporin family protein 0.50 ABZR86_RS00580 protease HtpX low > 74
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.470.1 Glycerol uptake facilitator protein 0.52 Xcc-8004.2262.1 Probable protease htpX homolog (EC 3.4.24.-) low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU3133 glpF glycerol uptake facilitator protein (TIGR) 0.19 DVU2494 peptidase, M48 family (TIGR) low > 55
Fusobacterium nucleatum SB010 0.18 HUW76_01970 aquaporin family protein 0.23 HUW76_05515 M48 family metalloprotease low > 35

Not shown: 9 genomes with orthologs for PP_1076 only; 27 genomes with orthologs for PP_1871 only