| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_3415 | | Transcriptional regulator, LacI family | 1.0 | PP_1021 | | DNA-binding transcriptional regulator | 0.40 | 2 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.68 | Psyr_3336 | | transcriptional regulator, LacI family | 0.91 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.68 | Psyr_3336 | | transcriptional regulator, LacI family | 0.91 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_1925 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.91 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_558 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.90 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.67 | Pf6N2E2_2865 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.90 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.67 | AO356_05065 | | LacI family transcriptional regulator | 0.90 | AO356_05165 | | transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_03255 | | LacI family transcriptional regulator | 0.91 | AO353_03365 | | transcriptional regulator | low | > 101 |
| Pseudomonas sp. RS175 | 0.66 | PFR28_00593 | | HTH-type transcriptional regulator GntR | 0.90 | PFR28_00572 | | HTH-type transcriptional regulator HexR | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.89 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | 0.55 | 8 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.89 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | 0.40 | 5 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_21990 | | LacI family transcriptional regulator | 0.88 | PS417_22115 | | transcriptional regulator | low | > 88 |
| Acidovorax sp. GW101-3H11 | 0.55 | Ac3H11_3230 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.36 | Ac3H11_2055 | | Probable transcriptional regulator | low | > 79 |
| Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS12285 | | LacI family DNA-binding transcriptional regulator | 0.41 | ABCV34_RS08655 | | SIS domain-containing protein | low | > 48 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_2126 | | Transcriptional regulators | 0.88 | Psest_0851 | | Transcriptional regulators | low | > 67 |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_05332 | | HTH-type transcriptional regulator GntR | 0.32 | MPMX19_05117 | | HTH-type transcriptional regulator HexR | low | > 112 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_01485 | | transcriptional regulator | 0.57 | CSW01_05825 | | transcriptional regulator HexR | low | > 62 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS19900 | | gluconate operon transcriptional repressor GntR | 0.55 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | low | > 71 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS20970 | | gluconate operon transcriptional repressor GntR | 0.55 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS19785 | | gluconate operon transcriptional repressor GntR | 0.56 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_03475 | | Gluconate utilization system GNT-I transcriptional repressor | 0.52 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Klebsiella michiganensis M5al | 0.30 | BWI76_RS06150 | | transcriptional regulator | 0.55 | BWI76_RS18110 | | transcriptional regulator HexR | low | > 92 |
| Rahnella sp. WP5 | 0.30 | EX31_RS05060 | | gluconate operon transcriptional repressor GntR | 0.55 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS19160 | gntR | gluconate operon transcriptional repressor GntR | 0.49 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | low | > 74 |
| Pantoea sp. MT58 | 0.29 | IAI47_01650 | | gluconate operon transcriptional repressor GntR | 0.50 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.29 | HER17_RS16515 | | LacI family DNA-binding transcriptional regulator | 0.56 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Enterobacter asburiae PDN3 | 0.29 | EX28DRAFT_4274 | | transcriptional regulator, LacI family | 0.55 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_04319 | | HTH-type transcriptional regulator GntR | 0.55 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | low | > 85 |
| Escherichia coli ECRC98 | 0.29 | JDDGAC_20465 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC99 | 0.29 | KEDOAH_11305 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC62 | 0.29 | BNILDI_02870 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli BW25113 | 0.29 | b3438 | gntR | DNA-binding transcriptional repressor (NCBI) | 0.55 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.29 | MCAODC_07365 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli Nissle 1917 | 0.29 | ECOLIN_RS19675 | | gluconate operon transcriptional repressor GntR | 0.55 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | low | > 52 |
| Escherichia coli ECOR38 | 0.29 | HEPCGN_15660 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | low | > 85 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.29 | OHPLBJKB_00264 | | HTH-type transcriptional regulator GntR | 0.55 | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | low | > 73 |
| Escherichia coli ECRC102 | 0.29 | NIAGMN_14605 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC101 | 0.29 | OKFHMN_16835 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia fergusonii Becca | 0.29 | EFB2_00382 | | HTH-type transcriptional regulator GntR | 0.55 | EFB2_02089 | | HTH-type transcriptional regulator HexR | low | > 86 |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS04445 | | LacI family DNA-binding transcriptional regulator | 0.26 | ABIE40_RS21410 | | MurR/RpiR family transcriptional regulator | low | > 107 |
| Escherichia coli ECOR27 | 0.28 | NOLOHH_08635 | gntR | gluconate operon transcriptional repressor GntR | 0.55 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | low | > 57 |
| Escherichia coli BL21 | 0.28 | ECD_03289 | | d-gluconate inducible gluconate regulon transcriptional repressor | 0.55 | ECD_01824 | | putative DNA-binding transcriptional regulator | low | > 60 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_23965 | | gluconate operon transcriptional repressor GntR | 0.55 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.28 | GFF406 | | Transcriptional regulator, LacI family | 0.55 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | low | > 78 |
| Ralstonia solanacearum PSI07 | 0.28 | RPSI07_RS07575 | | LacI family DNA-binding transcriptional regulator | 0.23 | RPSI07_RS05455 | | MurR/RpiR family transcriptional regulator | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS18255 | | LacI family DNA-binding transcriptional regulator | 0.23 | ABZR87_RS19110 | | MurR/RpiR family transcriptional regulator | low | > 80 |
| Agrobacterium fabrum C58 | 0.27 | Atu4685 | | LacI family transcriptional regulator | 0.23 | Atu2598 | | transcriptional regulator, RpiR family | low | > 89 |
Not shown: 16 genomes with orthologs for PP_3415 only; 10 genomes with orthologs for PP_1021 only