Conservation of cofitness between PP_3118 and PP_0396 in Pseudomonas putida KT2440

28 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Pseudomonas putida KT2440	1.0	PP_3118		DNA linked enzyme involved in DNA repair	1.0	PP_0396		conserved protein of unknown function	0.19	7
Pseudomonas fluorescens FW300-N2E2	0.65	Pf6N2E2_2086		DNA polymerase-like protein PA0670	0.89	Pf6N2E2_4800		yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data)	low	> 103
Pseudomonas fluorescens FW300-N2E3	0.65	AO353_22710		DNA repair nucleotidyltransferase	0.89	AO353_07340		yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data)	low	> 101
Pseudomonas fluorescens FW300-N2C3	0.64	AO356_21815		DNA repair nucleotidyltransferase	0.89	AO356_14310		yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data)	low	> 104
Pseudomonas fluorescens FW300-N1B4	0.64	Pf1N1B4_5680		DNA polymerase-like protein PA0670	0.89	Pf1N1B4_2522		FIG002076: hypothetical protein	low	> 87
Pseudomonas fluorescens GW456-L13	0.63	PfGW456L13_2821		DNA polymerase-like protein PA0670	0.89	PfGW456L13_1195		FIG002076: hypothetical protein	low	> 87
Pseudomonas sp. RS175	0.63	PFR28_01354		Protein ImuB	0.89	PFR28_04069		hypothetical protein	low	> 88
Pseudomonas simiae WCS417	0.62	PS417_15585		DNA repair nucleotidyltransferase	0.89	PS417_25835		hypothetical protein	low	> 88
Pseudomonas syringae pv. syringae B728a	0.61	Psyr_2522		conserved hypothetical protein	0.89	Psyr_4632		Protein of unknown function DUF444	low	> 86
Pseudomonas syringae pv. syringae B728a ΔmexB	0.61	Psyr_2522		conserved hypothetical protein	0.89	Psyr_4632		Protein of unknown function DUF444	low	> 86
Pseudomonas stutzeri RCH2	0.61	Psest_1979		Nucleotidyltransferase/DNA polymerase involved in DNA repair	0.86	Psest_3673		Uncharacterized conserved protein	low	> 67
Pseudomonas fluorescens SBW25-INTG	0.60	PFLU_RS17570		DNA polymerase Y family protein	0.89	PFLU_RS27490		YeaH/YhbH family protein	low	> 109
Pseudomonas fluorescens SBW25	0.60	PFLU_RS17570		DNA polymerase Y family protein	0.89	PFLU_RS27490		YeaH/YhbH family protein	low	> 109
Pseudomonas sp. S08-1	0.55	OH686_02405		DNA polymerase IV-like protein ImuB	0.87	OH686_15015		UPF0229 protein YeaH	low	> 80
Marinobacter adhaerens HP15	0.25	HP15_1334		Error-prone polymerase for DNA repair (imuB or polY like) (from data)	0.65	HP15_2934		protein YeaH	low	> 73
Paraburkholderia sabiae LMG 24235	0.17	QEN71_RS43590		DNA polymerase Y family protein	0.54	QEN71_RS07380		YeaH/YhbH family protein	low	> 153
Paraburkholderia graminis OAS925	0.15	ABIE53_000205		protein ImuB	0.56	ABIE53_002317		uncharacterized sporulation protein YeaH/YhbH (DUF444 family)	low	> 113
Paraburkholderia bryophila 376MFSha3.1	0.15	H281DRAFT_04986		protein ImuB	0.56	H281DRAFT_05233		hypothetical protein	low	> 103
Cupriavidus basilensis FW507-4G11	0.14	RR42_RS32800		nucleotidyltransferase	0.52	RR42_RS36480		hypothetical protein	low	> 128
Herbaspirillum seropedicae SmR1	0.13	HSERO_RS11285		DNA polymerase	0.53	HSERO_RS21695		hypothetical protein	low	> 78
Ralstonia sp. UNC404CL21Col	0.13	ABZR87_RS20565		DNA polymerase Y family protein	0.50	ABZR87_RS14215		YeaH/YhbH family protein	low	> 80
Sinorhizobium meliloti 1021	0.12	SMc03789		hypothetical protein	0.40	SMc01266		hypothetical protein	low	> 103
Alteromonas macleodii MIT1002	0.12	MIT1002_00041		Nucleotidyltransferase/DNA polymerase involved in DNA repair	0.59	MIT1002_01232		hypothetical protein	low	> 70
Variovorax sp. SCN45	0.11	GFF679		DNA polymerase-like protein PA0670	0.46	GFF2934		FIG002076: hypothetical protein	low	> 127
Phaeobacter inhibens DSM 17395	0.10	PGA1_c00330		Error-prone polymerase for DNA repair (imuB or polY like) (from data)	0.41	PGA1_c02480		Uncharacterized conserved protein	low	> 62
Variovorax sp. OAS795	0.10	ABID97_RS19220		DNA polymerase Y family protein	0.45	ABID97_RS10265		YeaH/YhbH family protein	low	> 91
Azospirillum sp. SherDot2	0.09	MPMX19_00258		Protein ImuB	0.42	MPMX19_02156		hypothetical protein	low	> 112
Magnetospirillum magneticum AMB-1	0.08	AMB_RS15105		DNA polymerase Y family protein	0.43	AMB_RS10890		hypothetical protein	—	—
Acidovorax sp. GW101-3H11	0.07	Ac3H11_4194		DNA polymerase-like protein PA0670	0.49	Ac3H11_1146		FIG002076: hypothetical protein	low	> 79

Not shown: 21 genomes with orthologs for PP_3118 only; 34 genomes with orthologs for PP_0396 only