Conservation of cofitness between PP_0120 and PP_0119 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0120 putative zinc ABC transporter 1.0 PP_0119 putative zinc uptake regulation protein ZUR 0.48 3
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_597 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.77 PfGW456L13_598 Zinc uptake regulation protein ZUR 0.32 28
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1872 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.73 Pf1N1B4_1871 Zinc uptake regulation protein ZUR low > 87
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_10915 ABC transporter substrate-binding protein 0.84 AO353_10910 Fur family transcriptional regulator
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.86 PFLU_RS00375 transcriptional repressor
Pseudomonas fluorescens SBW25 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.86 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas sp. RS175 0.75 PFR28_04621 High-affinity zinc uptake system protein ZnuA 0.87 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4165 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.79 Pf6N2E2_4166 Zinc uptake regulation protein ZUR
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_11480 ABC transporter substrate-binding protein 0.88 AO356_11485 Fur family transcriptional regulator
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0275 Periplasmic solute binding protein 0.84 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0275 Periplasmic solute binding protein 0.84 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas simiae WCS417 0.70 PS417_00390 ABC transporter substrate-binding protein 0.85 PS417_00385 Fur family transcriptional regulator low > 88
Pseudomonas sp. S08-1 0.67 OH686_12235 Zinc ABC transporter, substrate-binding protein ZnuA 0.73 OH686_12240 Zinc uptake regulation protein Zur 0.58 33
Pseudomonas stutzeri RCH2 0.62 Psest_4307 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.79 Psest_4308 Fe2+/Zn2+ uptake regulation proteins
Escherichia coli ECRC102 0.35 NIAGMN_01755 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur
Escherichia coli ECRC101 0.35 MCAODC_19100 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 MCAODC_03550 zur zinc uptake transcriptional repressor Zur
Escherichia coli ECRC99 0.35 KEDOAH_01800 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur
Escherichia coli ECRC98 0.35 JDDGAC_00880 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur
Escherichia coli ECRC101 0.35 OKFHMN_26305 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1636 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.28 GFF1416 Zinc uptake regulation protein ZUR low > 78
Pectobacterium carotovorum WPP14 0.34 HER17_RS11805 zinc ABC transporter substrate-binding protein ZnuA 0.33 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01871 High-affinity zinc uptake system protein ZnuA 0.28 OHPLBJKB_03997 Zinc uptake regulation protein low > 73
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0699 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.29 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Escherichia fergusonii Becca 0.34 EFB2_02085 High-affinity zinc uptake system protein ZnuA 0.27 EFB2_04557 Zinc uptake regulation protein 0.35 47
Escherichia coli BW25113 0.34 b1857 yebL putative adhesin (VIMSS) 0.28 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli BL21 0.34 ECD_01828 zinc ABC transporter periplasmic binding protein 0.28 ECD_03918 transcriptional repressor, Zn(II)-binding low > 60
Escherichia coli ECOR38 0.34 HEPCGN_04710 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 85
Escherichia coli ECOR27 0.33 NOLOHH_16745 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur low > 57
Escherichia coli ECRC62 0.33 BNILDI_15535 znuA zinc ABC transporter substrate-binding protein ZnuA 0.28 BNILDI_06315 zur zinc uptake transcriptional repressor Zur
Escherichia coli Nissle 1917 0.33 ECOLIN_RS10345 zinc ABC transporter substrate-binding protein ZnuA 0.27 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur low > 52
Dickeya dianthicola 67-19 0.33 HGI48_RS10130 zinc ABC transporter substrate-binding protein ZnuA 0.32 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Dickeya dadantii 3937 0.33 DDA3937_RS10100 zinc ABC transporter substrate-binding protein ZnuA 0.33 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Klebsiella michiganensis M5al 0.33 BWI76_RS18130 zinc ABC transporter substrate-binding protein 0.28 BWI76_RS01890 transcriptional regulator Zur low > 92
Serratia liquefaciens MT49 0.32 IAI46_14605 zinc ABC transporter substrate-binding protein ZnuA 0.31 IAI46_22990 zinc uptake transcriptional repressor Zur low > 86
Erwinia tracheiphila SCR3 0.31 LU632_RS13395 znuA zinc ABC transporter substrate-binding protein ZnuA 0.29 LU632_RS22295 zur zinc uptake transcriptional repressor Zur low > 74
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_10400 zinc ABC transporter substrate-binding protein 0.32 CSW01_01980 transcriptional regulator Zur low > 62
Dickeya dianthicola ME23 0.31 DZA65_RS10545 zinc ABC transporter substrate-binding protein ZnuA 0.32 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Magnetospirillum magneticum AMB-1 0.30 AMB_RS11665 zinc ABC transporter substrate-binding protein 0.53 AMB_RS11670 transcriptional repressor
Rahnella sp. WP5 0.29 EX31_RS10675 zinc ABC transporter substrate-binding protein ZnuA 0.30 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Azospirillum sp. SherDot2 0.29 MPMX19_05515 High-affinity zinc uptake system protein ZnuA 0.55 MPMX19_01585 Zinc uptake regulation protein low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS01585 zinc transporter 0.54 AZOBR_RS09280 Fur family transcriptional regulator low > 97
Phaeobacter inhibens DSM 17395 0.25 PGA1_262p02220 ABC transporter, periplasmic solute-binding protein 0.43 PGA1_262p02230 zinc uptake regulation protein zur-like protein
Dinoroseobacter shibae DFL-12 0.24 Dshi_1704 periplasmic solute binding protein (RefSeq) 0.37 Dshi_1703 putative ferric uptake regulator, Fur family (RefSeq) low > 64
Marinobacter adhaerens HP15 0.23 HP15_2237 ABC transporter metal-binding lipoprotein 0.58 HP15_3521 zinc uptake regulation protein
Rhodopseudomonas palustris CGA009 0.16 TX73_004435 metal ABC transporter substrate-binding protein 0.38 TX73_002680 Fur family transcriptional regulator low > 86
Acinetobacter radioresistens SK82 0.14 MPMX26_00096 High-affinity zinc uptake system protein ZnuA 0.44 MPMX26_00095 Zinc uptake regulation protein 0.71 11

Not shown: 5 genomes with orthologs for PP_0120 only; 18 genomes with orthologs for PP_0119 only