Conservation of cofitness between PFR28_03973 and PFR28_03611 in Pseudomonas sp. RS175

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas sp. RS175 1.0 PFR28_03973 Inner membrane transport protein YajR 1.0 PFR28_03611 HTH-type transcriptional regulator CdhR 0.34 11
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2612 Putative transport protein 0.89 Pf1N1B4_968 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain low > 87
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_1284 Putative transport protein 0.95 PfGW456L13_1629 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain low > 87
Pseudomonas sp. DMC3 0.94 GFF3793 Inner membrane transport protein YajR 0.95 GFF4442 HTH-type transcriptional regulator CdhR low > 89
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_06850 MFS transporter 0.95 AO353_15220 AraC family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_4889 Putative transport protein 0.97 Pf6N2E2_5332 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain low > 103
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_14790 MFS transporter 0.98 AO356_17040 AraC family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.91 PS417_25390 MFS transporter 0.93 PS417_04130 AraC family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.91 PFLU_RS27020 MFS transporter 0.93 PFLU_RS04170 GlxA family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS27020 MFS transporter 0.93 PFLU_RS04170 GlxA family transcriptional regulator low > 109
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4519 General substrate transporter:Major facilitator superfamily 0.87 Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4519 General substrate transporter:Major facilitator superfamily 0.87 Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein low > 86
Pseudomonas sp. SVBP6 0.86 COO64_RS16070 MFS transporter 0.82 COO64_RS11775 GlxA family transcriptional regulator low > 93
Pseudomonas sp. BP01 0.84 JOY50_RS20300 MFS transporter 0.82 JOY50_RS15235 GlxA family transcriptional regulator low > 84
Pseudomonas putida KT2440 0.83 PP_0484 transporter of an unknown substrate 0.83 PP_1313 Transcriptional regulator, AraC family low > 96
Pseudomonas sp. S08-1 0.75 OH686_15500 Inner membrane transport protein YajR 0.80 OH686_08420 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain low > 80
Pseudomonas aeruginosa PA14 0.71 IKLFDK_21790 MFS transporter 0.78 IKLFDK_01910 AraC family transcriptional regulator low > 101
Pseudomonas stutzeri RCH2 0.70 Psest_3575 Arabinose efflux permease 0.76 Psest_0723 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain low > 67
Pantoea sp. MT58 0.54 IAI47_14705 MFS transporter 0.18 IAI47_19830 helix-turn-helix domain-containing protein low > 76
Dickeya dadantii 3937 0.53 DDA3937_RS05575 MFS transporter 0.19 DDA3937_RS16425 helix-turn-helix domain-containing protein low > 74
Dickeya dianthicola 67-19 0.51 HGI48_RS05635 MFS transporter 0.19 HGI48_RS03790 helix-turn-helix domain-containing protein low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS05960 MFS transporter 0.19 DZA65_RS03920 helix-turn-helix domain-containing protein low > 75
Marinobacter adhaerens HP15 0.44 HP15_407 transporter, major facilitator family 0.33 HP15_2577 protein containing helix-turn-helix, AraC domain low > 73
Shewanella amazonensis SB2B 0.43 Sama_0515 transporter, putative (RefSeq) 0.27 Sama_2508 transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.40 Shew_0534 major facilitator transporter (RefSeq) 0.22 Shew_3785 AraC family transcriptional regulator (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS07125 MFS transporter 0.19 ABZR87_RS23330 helix-turn-helix domain-containing protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_01912 Predicted arabinose efflux permease, MFS family 0.19 H281DRAFT_06215 Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain — —
Acidovorax sp. GW101-3H11 0.29 Ac3H11_4384 putative transport protein 0.18 Ac3H11_95 transcriptional regulator, AraC family low > 79
Alteromonas macleodii MIT1002 0.29 MIT1002_00180 Inner membrane transport protein YajR 0.30 MIT1002_02277 Carnitine catabolism transcriptional activator low > 70

Not shown: 43 genomes with orthologs for PFR28_03973 only; 3 genomes with orthologs for PFR28_03611 only