Conservation of cofitness between PFLU_RS09095 and PFLU_RS00295 in Pseudomonas fluorescens SBW25

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS09095 AI-2E family transporter 1.0 PFLU_RS00295 cytochrome c oxidase subunit I 0.51 11
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS09095 AI-2E family transporter 1.00 PFLU_RS00295 cytochrome c oxidase subunit I low > 109
Pseudomonas simiae WCS417 0.99 PS417_09040 hypothetical protein 1.00 PS417_00305 cytochrome oxidase subunit I low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_5882 Putative membrane protein 0.97 Pf6N2E2_4099 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_19830 hypothetical protein 0.97 AO356_11165 cytochrome oxidase subunit I low > 104
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_2055 Putative membrane protein 0.97 PfGW456L13_614 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas sp. RS175 0.84 PFR28_03068 Putative transport protein YdiK 0.97 PFR28_04690 Cytochrome c oxidase subunit 1 low > 88
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_3528 Putative membrane protein 0.97 Pf1N1B4_1854 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_01690 hypothetical protein 0.96 AO353_10835 cytochrome oxidase subunit I low > 101
Pseudomonas putida KT2440 0.78 PP_4162 conserved membrane protein of unknown function 0.94 PP_0104 Cytochrome c oxidase subunit 1 low > 96
Pseudomonas sp. S08-1 0.68 OH686_01920 Uncharacterized UPF0118 membrane protein 0.93 OH686_12320 cytochrome c oxidase, subunit I low > 80
Pseudomonas stutzeri RCH2 0.67 Psest_2464 Predicted permease 0.91 Psest_4327 cytochrome c oxidase, subunit I low > 67
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS03900 membrane protein 0.70 RR42_RS01880 cytochrome oxidase subunit I low > 128
Paraburkholderia graminis OAS925 0.38 ABIE53_001629 putative PurR-regulated permease PerM 0.72 ABIE53_000674 cytochrome c oxidase subunit 1 low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS06810 membrane protein 0.72 BPHYT_RS02645 cytochrome oxidase subunit I — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04605 Predicted PurR-regulated permease PerM 0.72 H281DRAFT_01993 cytochrome c oxidase subunit 1 low > 103
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS23970 AI-2E family transporter 0.72 QEN71_RS01500 cytochrome c oxidase subunit I low > 153
Sinorhizobium meliloti 1021 0.33 SMa0447 hypothetical protein 0.53 SMc00010 cytochrome C oxidase polypeptide I transmembrane protein low > 103
Rhizobium sp. OAE497 0.25 ABIE40_RS23785 AI-2E family transporter 0.52 ABIE40_RS04065 cytochrome c oxidase subunit I low > 107
Azospirillum brasilense Sp245 0.19 AZOBR_RS27390 transporter 0.54 AZOBR_RS10585 cytochrome C oxidase subunit I low > 97
Shewanella sp. ANA-3 0.19 Shewana3_2910 hypothetical protein (RefSeq) 0.82 Shewana3_3992 cytochrome c oxidase, subunit I (RefSeq) low > 73
Shewanella loihica PV-4 0.19 Shew_0691 hypothetical protein (RefSeq) 0.81 Shew_0124 cytochrome-c oxidase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.18 SO0472 membrane protein, putative (NCBI ptt file) 0.82 SO4607 cytochrome c oxidase, subunit I (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3026 putative membrane protein 0.69 GFF689 Cytochrome c oxidase polypeptide I (EC 1.9.3.1) low > 90
Agrobacterium fabrum C58 0.17 Atu1739 permease 0.52 Atu0768 cytochrome-c oxidase chain I low > 89
Desulfovibrio vulgaris Hildenborough JW710 0.11 DVU0128 membrane protein, putative (TIGR) 0.40 DVU1815 cytochrome c oxidase, subunit I, putative (TIGR) low > 55

Not shown: 29 genomes with orthologs for PFLU_RS09095 only; 37 genomes with orthologs for PFLU_RS00295 only