Conservation of cofitness between NOLOHH_06505 and NOLOHH_13140 in Escherichia coli ECOR27

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06505 rarD EamA family transporter RarD 1.0 NOLOHH_13140 mltF membrane-bound lytic murein transglycosylase MltF 0.65 9
Escherichia coli ECRC62 1.00 BNILDI_05025 rarD EamA family transporter RarD 1.00 BNILDI_11940 mltF membrane-bound lytic murein transglycosylase MltF low > 75
Escherichia coli ECRC100 1.00 OKFHMN_14375 rarD EamA family transporter RarD 1.00 OKFHMN_21465 mltF membrane-bound lytic murein transglycosylase MltF low > 80
Escherichia coli ECRC98 1.00 JDDGAC_18000 rarD EamA family transporter RarD 1.00 JDDGAC_25130 mltF membrane-bound lytic murein transglycosylase MltF low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13775 rarD EamA family transporter RarD 1.00 KEDOAH_06755 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli ECRC102 1.00 NIAGMN_12130 rarD EamA family transporter RarD 1.00 NIAGMN_19235 mltF membrane-bound lytic murein transglycosylase MltF — —
Escherichia coli BW25113 0.99 b3819 rarD predicted chloramphenical resistance permease (NCBI) 1.00 b2558 mltF predicted periplasmic binding protein/transglycosylase (RefSeq) low > 76
Escherichia fergusonii Becca 0.99 EFB2_04818 Protein RarD 1.00 EFB2_01338 Membrane-bound lytic murein transglycosylase F low > 86
Escherichia coli ECOR38 0.99 HEPCGN_13075 rarD EamA family transporter RarD 1.00 HEPCGN_20610 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli ECRC101 0.99 MCAODC_04880 rarD EamA family transporter RarD 1.00 MCAODC_11995 mltF membrane-bound lytic murein transglycosylase MltF low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04232 Protein RarD 1.00 OHPLBJKB_01149 Membrane-bound lytic murein transglycosylase F low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS21920 EamA family transporter RarD 1.00 ECOLIN_RS14475 membrane-bound lytic murein transglycosylase MltF low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF245 Protein rarD 0.85 GFF2461 Transglycosylase, Slt family low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4484 rarD protein 0.76 EX28DRAFT_0090 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04461 Protein RarD 0.79 MPMX20_03427 Membrane-bound lytic murein transglycosylase F low > 85
Klebsiella michiganensis M5al 0.87 BWI76_RS01230 chloramphenicol resistance permease RarD 0.75 BWI76_RS21275 lytic transglycosylase F low > 92
Serratia liquefaciens MT49 0.80 IAI46_00755 EamA family transporter RarD 0.55 IAI46_19480 membrane-bound lytic murein transglycosylase MltF low > 86
Pectobacterium carotovorum WPP14 0.76 HER17_RS01380 EamA family transporter RarD 0.55 HER17_RS05905 membrane-bound lytic murein transglycosylase MltF 0.52 64
Erwinia tracheiphila SCR3 0.74 LU632_RS24110 rarD EamA family transporter RarD 0.60 LU632_RS17980 mltF membrane-bound lytic murein transglycosylase MltF low > 74
Pantoea sp. MT58 0.73 IAI47_18375 EamA family transporter RarD 0.60 IAI47_04925 membrane-bound lytic murein transglycosylase MltF low > 76
Rahnella sp. WP5 0.71 EX31_RS15195 EamA family transporter RarD 0.55 EX31_RS21890 membrane-bound lytic murein transglycosylase MltF low > 89
Dickeya dadantii 3937 0.67 DDA3937_RS19865 EamA family transporter RarD 0.59 DDA3937_RS15660 membrane-bound lytic murein transglycosylase MltF low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS21060 EamA family transporter RarD 0.59 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS20020 EamA family transporter RarD 0.59 HGI48_RS15755 membrane-bound lytic murein transglycosylase MltF low > 71
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_01040 protein RarD 0.43 CSW01_04460 lytic transglycosylase F low > 62
Shewanella oneidensis MR-1 0.59 SO4243 rarD rarD protein (NCBI ptt file) 0.34 SO3288 transglycosylase, Slt family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.58 Shewana3_3765 transporter DMT superfamily protein (RefSeq) 0.34 Shewana3_1239 lytic transglycosylase, catalytic (RefSeq) low > 73
Shewanella loihica PV-4 0.57 Shew_3476 transporter DMT superfamily protein (RefSeq) 0.33 Shew_1300 lytic transglycosylase, catalytic (RefSeq) low > 60
Shewanella amazonensis SB2B 0.55 Sama_0332 rarD protein (RefSeq) 0.35 Sama_2351 Slt family transglycosylase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.49 MIT1002_00151 putative chloramphenical resistance permease RarD 0.33 MIT1002_01026 Membrane-bound lytic murein transglycosylase F precursor low > 70
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2480 Protein rarD 0.31 Pf1N1B4_888 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_1142 Protein rarD 0.30 PfGW456L13_4836 Transglycosylase, Slt family low > 87
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_07550 chloramphenical resistance permease RarD 0.30 AO353_04490 murein transglycosylase low > 101
Pseudomonas putida KT2440 0.46 PP_0358 conserved membrane protein of unknown function 0.28 PP_1036 membrane-bound lytic murein transglycosylase F low > 96
Pseudomonas stutzeri RCH2 0.41 Psest_0356 rarD protein 0.29 Psest_1217 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 67
Marinobacter adhaerens HP15 0.39 HP15_2670 RarD protein, DMT superfamily transporter 0.30 HP15_1238 transglycosylase, Slt family protein low > 73
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_0490 rarD protein 0.34 B158DRAFT_2243 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein low > 40
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU2425 rarD rarD protein (TIGR) 0.12 DVU3205 transglycosylase SLT domain protein (TIGR) low > 55
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_03622 chloramphenicol-sensitive protein RarD 0.07 H281DRAFT_03343 Membrane-bound lytic murein transglycosylase MltF low > 103

Not shown: 41 genomes with orthologs for NOLOHH_06505 only; 1 genomes with orthologs for NOLOHH_13140 only