Conservation of cofitness between NOLOHH_06475 and NOLOHH_09470 in Escherichia coli ECOR27

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_06475 pldB lysophospholipase L2 1.0 NOLOHH_09470 dusB tRNA dihydrouridine synthase DusB 0.75 16
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_00564 tRNA-dihydrouridine synthase B low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21960 lysophospholipase L2 1.00 ECOLIN_RS18725 tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC62 1.00 BNILDI_05055 pldB lysophospholipase L2 1.00 BNILDI_02050 dusB tRNA dihydrouridine synthase DusB low > 75
Escherichia coli BL21 1.00 ECD_03704 lysophospholipase L2 1.00 ECD_03118 tRNA-dihydrouridine synthase B low > 61
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 1.00 b3260 dusB tRNA-dihydrouridine synthase B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 0.89 OHPLBJKB_00445 putative tRNA-dihydrouridine synthase low > 73
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 0.90 JDDGAC_21310 dusB tRNA dihydrouridine synthase DusB 0.84 43
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 1.00 NIAGMN_15445 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 1.00 MCAODC_08205 dusB tRNA dihydrouridine synthase DusB low > 87
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 1.00 OKFHMN_17685 dusB tRNA dihydrouridine synthase DusB 0.89 3
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 0.90 KEDOAH_10465 dusB tRNA dihydrouridine synthase DusB — —
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 1.00 HEPCGN_16505 dusB tRNA dihydrouridine synthase DusB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.84 GFF2124 tRNA dihydrouridine synthase B (EC 1.-.-.-) low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.96 MPMX20_04169 tRNA-dihydrouridine synthase B 0.22 19
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.94 EX28DRAFT_3313 putative TIM-barrel protein, nifR3 family low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.95 BWI76_RS25565 tRNA dihydrouridine synthase DusB — —
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.89 IAI46_22775 tRNA dihydrouridine synthase DusB low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.86 IAI47_02385 tRNA dihydrouridine synthase DusB low > 76
Rahnella sp. WP5 0.61 EX31_RS15225 lysophospholipase L2 0.88 EX31_RS12180 tRNA dihydrouridine synthase DusB low > 89
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.90 DDA3937_RS01375 tRNA dihydrouridine synthase DusB low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.90 DZA65_RS01355 tRNA dihydrouridine synthase DusB low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.90 HGI48_RS01295 tRNA dihydrouridine synthase DusB low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.89 HER17_RS20235 tRNA dihydrouridine synthase DusB low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.64 Shew_0330 nifR3 family TIM-barrel protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.64 Shewana3_0399 nifR3 family TIM-barrel protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00685 lysophospholipase 0.69 CSW01_01495 tRNA dihydrouridine synthase DusB low > 62
Shewanella oneidensis MR-1 0.30 SO4733 lypA lysophospholipase L2 (NCBI ptt file) 0.64 SO0394 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.67 Sama_3225 tRNA-dihydrouridine synthase B (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00479 lysophospholipase L2 0.70 MIT1002_03957 putative tRNA-dihydrouridine synthase low > 70
Dinoroseobacter shibae DFL-12 0.16 Dshi_0780 alpha/beta hydrolase fold (RefSeq) 0.32 Dshi_1576 putative TIM-barrel protein, nifR3 family (RefSeq) low > 64
Agrobacterium fabrum C58 0.16 Atu3886 lysophospholipase 0.37 Atu1444 nitrogen regulation protein low > 89
Rhizobium sp. OAE497 0.15 ABIE40_RS16315 alpha/beta hydrolase 0.35 ABIE40_RS09080 tRNA dihydrouridine synthase DusB low > 107
Rhodopseudomonas palustris CGA009 0.15 TX73_004575 alpha/beta hydrolase 0.35 TX73_013410 tRNA dihydrouridine synthase DusB — —
Caulobacter crescentus NA1000 Δfur 0.15 CCNA_02336 lysophospholipase L2 0.28 CCNA_01813 tRNA-dihydrouridine synthase low > 67
Caulobacter crescentus NA1000 0.15 CCNA_02336 lysophospholipase L2 0.28 CCNA_01813 tRNA-dihydrouridine synthase low > 66
Sinorhizobium meliloti 1021 0.15 SMc04041 lysophospholipase L2 protein 0.37 SMc01041 NIFR3-like protein — —
Phaeobacter inhibens DSM 17395 0.15 PGA1_c07480 Lysophospholipase 0.36 PGA1_c14770 tRNA-dihydrouridine synthase DusB low > 62
Azospirillum sp. SherDot2 0.15 MPMX19_00440 Lysophospholipase L2 0.38 MPMX19_01110 tRNA-dihydrouridine synthase B low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.14 A4249_RS12480 alpha/beta hydrolase 0.32 A4249_RS04810 tRNA dihydrouridine synthase DusB low > 48
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_3246 Lysophospholipase 0.37 Ga0059261_0140 tRNA-U20-dihydrouridine synthase 0.42 17

Not shown: 1 genomes with orthologs for NOLOHH_06475 only; 55 genomes with orthologs for NOLOHH_09470 only