Conservation of cofitness between LU632_RS22445 and LU632_RS02610 in Erwinia tracheiphila SCR3

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Erwinia tracheiphila SCR3 1.0 LU632_RS22445 aroE shikimate dehydrogenase 1.0 LU632_RS02610 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.60 12
Erwinia amylovora T8 0.67 OLJFJH_03685 shikimate dehydrogenase 0.88 OLJFJH_01495 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Serratia liquefaciens MT49 0.67 IAI46_23240 shikimate dehydrogenase 0.83 IAI46_03030 bifunctional aspartate kinase/homoserine dehydrogenase I 0.64 25
Pantoea sp. MT58 0.66 IAI47_02315 shikimate dehydrogenase 0.86 IAI47_16215 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_0046 shikimate dehydrogenase 0.81 EX28DRAFT_3614 aspartate kinase (EC 2.7.2.4) low > 76
Escherichia coli ECRC99 0.64 KEDOAH_10585 aroE shikimate dehydrogenase 0.82 KEDOAH_17045 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECRC102 0.64 NIAGMN_15325 aroE shikimate dehydrogenase 0.82 NIAGMN_08960 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Enterobacter sp. TBS_079 0.64 MPMX20_04189 Shikimate dehydrogenase (NADP(+)) 0.81 MPMX20_00710 Bifunctional aspartokinase/homoserine dehydrogenase 1 0.85 37
Escherichia coli ECRC100 0.64 OKFHMN_17565 aroE shikimate dehydrogenase 0.82 OKFHMN_11110 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.95 33
Escherichia coli ECRC101 0.64 MCAODC_08085 aroE shikimate dehydrogenase 0.82 MCAODC_01625 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.74 73
Escherichia coli ECRC98 0.64 JDDGAC_21185 aroE shikimate dehydrogenase 0.82 JDDGAC_14705 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.84 21
Escherichia coli Nissle 1917 0.64 ECOLIN_RS18840 shikimate dehydrogenase 0.82 ECOLIN_RS00010 bifunctional aspartate kinase/homoserine dehydrogenase I low > 55
Escherichia coli BL21 0.63 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 0.82 ECD_00002 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 0.82 OHPLBJKB_03658 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 73
Escherichia coli ECRC62 0.63 BNILDI_02165 aroE shikimate dehydrogenase 0.82 BNILDI_08160 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.92 33
Escherichia coli ECOR27 0.63 NOLOHH_09355 aroE shikimate dehydrogenase 0.82 NOLOHH_03440 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli BW25113 0.63 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 0.82 b0002 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) 0.92 23
Escherichia coli ECOR38 0.63 HEPCGN_16385 aroE shikimate dehydrogenase 0.82 HEPCGN_09115 thrA bifunctional aspartate kinase/homoserine dehydrogenase I 0.75 76
Escherichia fergusonii Becca 0.63 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 0.82 EFB2_04041 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 86
Rahnella sp. WP5 0.62 EX31_RS15950 shikimate dehydrogenase 0.82 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.82 GFF1078 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) low > 78
Dickeya dianthicola 67-19 0.62 HGI48_RS19190 shikimate dehydrogenase 0.79 HGI48_RS18345 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Dickeya dianthicola ME23 0.62 DZA65_RS20315 shikimate dehydrogenase 0.78 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Dickeya dadantii 3937 0.62 DDA3937_RS19100 shikimate dehydrogenase 0.79 DDA3937_RS18415 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Klebsiella michiganensis M5al 0.61 BWI76_RS25645 shikimate dehydrogenase 0.83 BWI76_RS04245 bifunctional aspartate kinase/homoserine dehydrogenase I 0.80 4
Pectobacterium carotovorum WPP14 0.61 HER17_RS02250 shikimate dehydrogenase 0.81 HER17_RS02795 bifunctional aspartate kinase/homoserine dehydrogenase I 0.84 63
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_00280 shikimate dehydrogenase 0.61 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Shewanella loihica PV-4 0.46 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.56 Shew_1079 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.78 55
Shewanella sp. ANA-3 0.45 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.56 Shewana3_1139 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) 0.89 47
Shewanella oneidensis MR-1 0.45 SO0040 aroE shikimate 5-dehydrogenase (NCBI ptt file) 0.56 SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.45 Sama_0052 shikimate dehydrogenase (RefSeq) 0.52 Sama_0905 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.31 MIT1002_00029 Shikimate dehydrogenase 0.53 MIT1002_03086 Aspartokinase I/homoserine dehydrogenase I — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.34 Xcc-8004.2957.1 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.75 45
Lysobacter sp. OAE881 0.30 ABIE51_RS01815 shikimate dehydrogenase 0.31 ABIE51_RS17520 bifunctional aspartate kinase/homoserine dehydrogenase I 0.70 26
Bacteroides ovatus ATCC 8483 0.15 BACOVA_05065 putative shikimate dehydrogenase 0.28 BACOVA_03021 homoserine dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.15 BT4215 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.29 BT2403 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) — —
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS14200 shikimate dehydrogenase 0.31 HMPREF1078_RS10385 bifunctional aspartate kinase/homoserine dehydrogenase I 0.92 28
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS06320 shikimate dehydrogenase 0.29 HMPREF1181_RS00060 bifunctional aspartate kinase/homoserine dehydrogenase I 0.84 9
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1145 Shikimate 5-dehydrogenase 0.34 Echvi_2000 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) — —
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS16750 shikimate dehydrogenase 0.32 HMPREF1058_RS14720 bifunctional aspartate kinase/homoserine dehydrogenase I low > 67
Phocaeicola dorei CL03T12C01 0.13 ABI39_RS12665 shikimate dehydrogenase 0.32 ABI39_RS10430 bifunctional aspartate kinase/homoserine dehydrogenase I 0.86 5
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.32 CA265_RS23475 aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.12 ABZR88_RS20055 shikimate dehydrogenase 0.32 ABZR88_RS18950 bifunctional aspartate kinase/homoserine dehydrogenase I — —

Not shown: 61 genomes with orthologs for LU632_RS22445 only; 0 genomes with orthologs for LU632_RS02610 only