Conservation of cofitness between JDDGAC_28305 and JDDGAC_28585 in Escherichia coli ECRC98

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28305 mdtB multidrug efflux RND transporter permease subunit MdtB 1.0 JDDGAC_28585 ugd UDP-glucose 6-dehydrogenase 0.71 9
Escherichia coli ECRC102 1.00 NIAGMN_22140 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 NIAGMN_22420 ugd UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC99 1.00 KEDOAH_03955 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 KEDOAH_03675 ugd UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC100 1.00 OKFHMN_24195 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 OKFHMN_24475 ugd UDP-glucose 6-dehydrogenase low > 80
Escherichia coli ECRC101 1.00 MCAODC_20745 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 MCAODC_20465 ugd UDP-glucose 6-dehydrogenase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_15540 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 NOLOHH_15790 ugd UDP-glucose 6-dehydrogenase low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS12200 multidrug efflux RND transporter permease subunit MdtB 0.99 ECOLIN_RS11985 UDP-glucose 6-dehydrogenase low > 55
Escherichia coli BW25113 1.00 b2075 mdtB multidrug efflux system, subunit B (NCBI) 0.99 b2028 ugd UDP-glucose 6-dehydrogenase (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_01780 Multidrug resistance protein MdtB 0.99 EFB2_01827 UDP-glucose 6-dehydrogenase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01629 Multidrug resistance protein MdtB 0.85 OHPLBJKB_01664 UDP-glucose 6-dehydrogenase — —
Escherichia coli ECRC62 1.00 BNILDI_14455 mdtB multidrug efflux RND transporter permease subunit MdtB 0.99 BNILDI_14700 ugd UDP-glucose 6-dehydrogenase low > 75
Escherichia coli ECOR38 1.00 HEPCGN_02885 mdtB multidrug efflux RND transporter permease subunit MdtB 1.00 HEPCGN_03180 ugd UDP-glucose 6-dehydrogenase low > 87
Escherichia coli BL21 1.00 ECD_01980 multidrug efflux system, subunit B 1.00 ECD_01930 UDP-glucose 6-dehydrogenase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF3854 Multidrug transporter MdtB 0.90 GFF3904 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS19255 multidrug transporter subunit MdtB 0.84 BWI76_RS19020 UDP-glucose 6-dehydrogenase — —
Enterobacter sp. TBS_079 0.90 MPMX20_03061 Multidrug resistance protein MdtB 0.86 MPMX20_03011 UDP-glucose 6-dehydrogenase — —
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0483 Cation/multidrug efflux pump 0.86 EX28DRAFT_0530 nucleotide sugar dehydrogenase — —
Pantoea sp. MT58 0.81 IAI47_06870 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.20 IAI47_09035 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Pectobacterium carotovorum WPP14 0.79 HER17_RS06320 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.75 HER17_RS06515 nucleotide sugar dehydrogenase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS15265 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.77 DDA3937_RS06790 nucleotide sugar dehydrogenase — —
Dickeya dianthicola ME23 0.77 DZA65_RS16165 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.76 DZA65_RS07165 nucleotide sugar dehydrogenase — —
Dickeya dianthicola 67-19 0.76 HGI48_RS15345 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.76 HGI48_RS06825 nucleotide sugar dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS07650 multidrug transporter 0.19 HSERO_RS10010 UDP-glucose 6-dehydrogenase low > 78
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS18120 multidrug transporter subunit MdtB 0.19 RALBFv3_RS13805 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Ralstonia solanacearum UW163 0.66 UW163_RS21010 multidrug transporter subunit MdtB 0.19 UW163_RS16005 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS05515 multidrug transporter subunit MdtB 0.19 RPSI07_RS19665 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS19025 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.19 ABZR87_RS09495 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Ralstonia solanacearum GMI1000 0.65 RS_RS22915 multidrug transporter subunit MdtB 0.19 RS_RS04540 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Pseudomonas putida KT2440 0.62 PP_3584 multidrug efflux transport system - membrane subunit 0.18 PP_2926 UDP-glucose 6-dehydrogenase low > 96
Pseudomonas sp. S08-1 0.62 OH686_00925 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) 0.67 OH686_14205 UDP-glucose 6-dehydrogenase low > 80
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3266 Acriflavin resistance plasma membrane protein 0.17 PfGW456L13_1685 GDP-mannose 6-dehydrogenase (EC 1.1.1.132) low > 87
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.18 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS13430 MdtB/MuxB family multidrug efflux RND transporter permease subunit 0.18 PFLU_RS17930 UDP-glucose/GDP-mannose dehydrogenase family protein low > 109
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2483 Acriflavin resistance protein 0.19 Psyr_5105 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2483 Acriflavin resistance protein 0.19 Psyr_5105 UDP-glucose 6-dehydrogenase low > 86
Castellaniella sp019104865 MT123 0.57 ABCV34_RS14620 multidrug efflux RND transporter permease subunit 0.73 ABCV34_RS12915 nucleotide sugar dehydrogenase low > 48
Variovorax sp. SCN45 0.56 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) 0.17 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF487 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.20 GFF4731 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 90
Variovorax sp. OAS795 0.54 ABID97_RS20855 efflux RND transporter permease subunit 0.18 ABID97_RS11855 UDP-glucose/GDP-mannose dehydrogenase family protein low > 91
Magnetospirillum magneticum AMB-1 0.52 AMB_RS17370 acriflavine resistance protein B 0.21 AMB_RS02980 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS16320 efflux RND transporter permease subunit 0.20 ABZR86_RS07210 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_16105 acrB Multidrug efflux pump subunit AcrB 0.20 OKGIIK_07930 UDP-glucose 6-dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.4792.1 Acriflavin resistance protein 0.19 Xcc-8004.3391.1 hypothetical protein — —
Bacteroides thetaiotaomicron VPI-5482 0.25 BT2252 multidrug efflux membrane fusion protein (NCBI ptt file) 0.60 BT0599 UDP-glucose 6-dehydrogenase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS05470 efflux RND transporter permease subunit 0.19 HMPREF1078_RS17435 UDP-glucose/GDP-mannose dehydrogenase family protein low > 61
Phaeobacter inhibens DSM 17395 0.13 PGA1_78p00510 multidrug transporter MdtB 0.18 PGA1_65p00450 UDP-glucose 6-dehydrogenase Ugd low > 62

Not shown: 20 genomes with orthologs for JDDGAC_28305 only; 21 genomes with orthologs for JDDGAC_28585 only