Conservation of cofitness between JDDGAC_01500 and JDDGAC_12700 in Escherichia coli ECRC98

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01500 astE succinylglutamate desuccinylase 1.0 JDDGAC_12700 betA choline dehydrogenase 0.61 19
Escherichia coli ECRC99 1.00 KEDOAH_01185 astE succinylglutamate desuccinylase 1.00 KEDOAH_18915 betA choline dehydrogenase — —
Escherichia coli ECRC101 1.00 MCAODC_18485 astE succinylglutamate desuccinylase 1.00 MCAODC_28275 betA choline dehydrogenase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_26925 astE succinylglutamate desuccinylase 1.00 OKFHMN_09050 betA choline dehydrogenase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_01140 astE succinylglutamate desuccinylase 1.00 NIAGMN_07105 betA choline dehydrogenase — —
Escherichia coli BW25113 1.00 b1744 astE succinylglutamate desuccinylase (NCBI) 0.97 b0311 betA choline dehydrogenase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01988 Succinylglutamate desuccinylase 0.98 OHPLBJKB_03364 Oxygen-dependent choline dehydrogenase low > 73
Escherichia coli ECOR27 1.00 NOLOHH_17440 astE succinylglutamate desuccinylase 0.98 NOLOHH_01900 betA choline dehydrogenase low > 75
Escherichia coli BL21 1.00 ECD_01713 succinylglutamate desuccinylase 0.97 ECD_00267 choline dehydrogenase, a flavoprotein low > 61
Escherichia fergusonii Becca 0.99 EFB2_02249 Succinylglutamate desuccinylase 0.97 EFB2_03724 Oxygen-dependent choline dehydrogenase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS09725 succinylglutamate desuccinylase 0.97 ECOLIN_RS02050 choline dehydrogenase — —
Escherichia coli ECRC62 0.99 BNILDI_16225 astE succinylglutamate desuccinylase 0.98 BNILDI_00025 betA choline dehydrogenase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_05290 astE succinylglutamate desuccinylase 0.97 HEPCGN_07610 betA choline dehydrogenase low > 87
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1748 succinylglutamate desuccinylase (EC 3.5.1.96) 0.94 EX28DRAFT_2388 choline dehydrogenase — —
Klebsiella michiganensis M5al 0.60 BWI76_RS11690 succinylglutamate desuccinylase 0.91 BWI76_RS07610 choline dehydrogenase low > 92
Enterobacter sp. TBS_079 0.59 MPMX20_01869 Succinylglutamate desuccinylase 0.94 MPMX20_01228 Oxygen-dependent choline dehydrogenase low > 85
Pantoea sp. MT58 0.57 IAI47_11075 succinylglutamate desuccinylase 0.86 IAI47_08645 choline dehydrogenase low > 76
Serratia liquefaciens MT49 0.46 IAI46_15315 succinylglutamate desuccinylase 0.82 IAI46_07720 choline dehydrogenase low > 86
Rahnella sp. WP5 0.45 EX31_RS17390 succinylglutamate desuccinylase 0.82 EX31_RS18815 choline dehydrogenase low > 89
Acinetobacter radioresistens SK82 0.42 MPMX26_02247 Succinylglutamate desuccinylase 0.77 MPMX26_02368 Oxygen-dependent choline dehydrogenase low > 36
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS07720 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.77 BPHYT_RS25155 oxygen-dependent choline dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.41 ABIE53_001774 succinylglutamate desuccinylase 0.77 ABIE53_006149 choline dehydrogenase low > 113
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23350 succinylglutamate desuccinylase 0.78 QEN71_RS08170 choline dehydrogenase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_06483 succinylglutamate desuccinylase 0.76 H281DRAFT_02463 choline dehydrogenase low > 103
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_02995 succinylglutamate desuccinylase 0.79 AO353_07810 choline dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_18755 succinylglutamate desuccinylase 0.79 AO356_13790 choline dehydrogenase low > 104
Pseudomonas simiae WCS417 0.32 PS417_21680 succinylglutamate desuccinylase 0.79 PS417_26345 choline dehydrogenase low > 88
Pseudomonas sp. RS175 0.32 PFR28_03277 Succinylglutamate desuccinylase 0.79 PFR28_04168 Oxygen-dependent choline dehydrogenase low > 88
Pseudomonas putida KT2440 0.32 PP_4475 succinylglutamate desuccinylase 0.79 PP_5064 choline dehydrogenase 0.37 13
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) 0.79 PfGW456L13_1082 Choline dehydrogenase (EC 1.1.99.1) low > 87
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3559 succinylglutamate desuccinylase 0.79 Psyr_4732 choline dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3559 succinylglutamate desuccinylase 0.79 Psyr_4732 choline dehydrogenase low > 86
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.79 Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) 0.25 101
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.78 Pf1N1B4_2416 Choline dehydrogenase (EC 1.1.99.1) 0.31 21
Pseudomonas fluorescens SBW25 0.30 PFLU_RS23285 succinylglutamate desuccinylase 0.78 PFLU_RS27995 choline dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS23285 succinylglutamate desuccinylase 0.78 PFLU_RS27995 choline dehydrogenase low > 109
Alteromonas macleodii MIT1002 0.30 MIT1002_01538 Succinylglutamate desuccinylase 0.48 MIT1002_02909 Choline dehydrogenase — —
Marinobacter adhaerens HP15 0.26 HP15_3034 succinylglutamate desuccinylase 0.51 HP15_3625 choline dehydrogenase low > 73
Pseudomonas stutzeri RCH2 0.22 Psest_2717 Succinylglutamate desuccinylase 0.77 Psest_2633 choline dehydrogenase low > 67

Not shown: 7 genomes with orthologs for JDDGAC_01500 only; 32 genomes with orthologs for JDDGAC_12700 only