Conservation of cofitness between IAI47_10665 and IAI47_16820 in Pantoea sp. MT58

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_10665 glycogen debranching protein GlgX 1.0 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase 0.24 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2548 Glycogen debranching enzyme (EC 3.2.1.-) 0.66 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 78
Enterobacter sp. TBS_079 0.85 MPMX20_02327 Glycogen operon protein GlgX 0.66 MPMX20_00558 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_1157 glycogen debranching enzyme GlgX 0.66 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 76
Klebsiella michiganensis M5al 0.84 BWI76_RS14140 glycogen debranching enzyme 0.64 BWI76_RS03020 tRNA hydroxylase low > 92
Pseudomonas putida KT2440 0.56 PP_4055 Glycogen debranching enzyme 0.31 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase low > 96
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4682 Glycogen debranching enzyme (EC 3.2.1.-) 0.32 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas sp. RS175 0.56 PFR28_02150 Glycogen operon protein GlgX 0.32 PFR28_02373 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_3250 Glycogen debranching enzyme (EC 3.2.1.-) 0.32 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas stutzeri RCH2 0.55 Psest_2167 glycogen debranching enzyme GlgX 0.31 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 67
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_26000 glycogen debranching protein 0.32 AO356_24405 tRNA hydroxylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_1073 Glycogen debranching enzyme (EC 3.2.1.-) 0.32 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 103
Pseudomonas sp. S08-1 0.55 OH686_01305 glycogen debranching enzyme GlgX 0.30 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase low > 80
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_23750 glycogen debranching protein 0.32 AO353_22955 tRNA hydroxylase low > 101
Rahnella sp. WP5 0.55 EX31_RS07170 glycogen debranching protein GlgX 0.37 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 0.31 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_2997 Glycoside hydrolase, family 13, N-terminal:Alpha amylase, catalytic region 0.31 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS16435 glycogen debranching protein GlgX 0.33 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS16435 glycogen debranching protein GlgX 0.33 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas simiae WCS417 0.54 PS417_14505 glycogen debranching protein 0.33 PS417_14975 tRNA hydroxylase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.50 CA264_08570 glycogen debranching enzyme 0.15 CA264_05350 tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE low > 74
Shewanella sp. ANA-3 0.47 Shewana3_2933 glycogen debranching enzyme GlgX (RefSeq) 0.53 Shewana3_2667 tRNA hydroxylase (RefSeq) low > 73
Shewanella loihica PV-4 0.47 Shew_1169 glycogen debranching enzyme GlgX (RefSeq) 0.57 Shew_2514 tRNA--hydroxylase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2452 glycogen operon protein (RefSeq) 0.52 Sama_1218 tRNA-hydroxylase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_02398 Glycogen debranching enzyme 0.62 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) low > 70
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_0086 glgX isoamylase. Glycosyl Hydrolase family 13. 0.19 Synpcc7942_0914 tRNA-(MS(2)IO(6)A)-hydroxylase-like low > 38
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_19235 glycogen debranching enzyme GlgX 0.59 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase low > 62

Not shown: 26 genomes with orthologs for IAI47_10665 only; 6 genomes with orthologs for IAI47_16820 only