Conservation of cofitness between IAI47_14515 and IAI47_14835 in Pantoea sp. MT58

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14515 multidrug efflux RND transporter permease subunit 1.0 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ 0.55 6
Erwinia tracheiphila SCR3 0.87 LU632_RS18185 efflux RND transporter permease subunit 0.81 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein — —
Rahnella sp. WP5 0.82 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.80 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.80 EX28DRAFT_2573 branched-chain amino acid uptake carrier low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.79 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ 0.33 20
Enterobacter sp. TBS_079 0.81 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.80 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4379 RND efflux system, inner membrane transporter CmeB 0.80 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Escherichia coli BL21 0.80 ECD_00413 multidrug efflux system protein 0.80 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val low > 60
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02750 efflux RND transporter permease AcrB 0.80 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ low > 52
Escherichia coli ECOR27 0.80 NOLOHH_01140 acrB efflux RND transporter permease AcrB 0.80 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 57
Escherichia coli ECRC62 0.80 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.80 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli BW25113 0.80 b0462 acrB multidrug efflux system protein (NCBI) 0.80 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia fergusonii Becca 0.80 EFB2_03596 Multidrug efflux pump subunit AcrB 0.80 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB 0.80 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein low > 73
Escherichia coli ECOR38 0.80 HEPCGN_06820 acrB efflux RND transporter permease AcrB 0.80 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 85
Escherichia coli ECRC101 0.80 OKFHMN_08205 acrB efflux RND transporter permease AcrB 0.80 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC102 0.80 NIAGMN_06260 acrB efflux RND transporter permease AcrB 0.80 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC99 0.80 KEDOAH_19760 acrB efflux RND transporter permease AcrB 0.80 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.80 MCAODC_27430 acrB efflux RND transporter permease AcrB 0.80 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Dickeya dadantii 3937 0.79 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.81 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein low > 74
Serratia liquefaciens MT49 0.78 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY 0.84 IAI46_04795 branched-chain amino acid transport system II carrier protein low > 86
Dickeya dianthicola ME23 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.81 DZA65_RS05830 branched-chain amino acid transport system II carrier protein low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.81 HGI48_RS05505 branched-chain amino acid transport system II carrier protein low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS15740 multidrug efflux RND transporter permease subunit 0.82 HER17_RS16020 branched-chain amino acid transport system II carrier protein low > 75
Pseudomonas sp. S08-1 0.69 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.69 OH686_01945 branched-chain amino acid transport system II carrier protein low > 80
Escherichia coli ECRC98 0.69 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF 0.80 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB 0.68 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04880 multidrug transporter 0.68 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas sp. RS175 0.68 PFR28_00631 putative efflux pump membrane transporter TtgB 0.68 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_17295 multidrug transporter 0.67 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas putida KT2440 0.68 PP_1385 Probable efflux pump membrane transporter TtgB 0.66 PP_4184 branched chain amino acid transporter low > 96
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB 0.66 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.68 Psyr_2015 Branched-chain amino acid transport system II carrier protein — —
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.68 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas simiae WCS417 0.68 PS417_06770 multidrug transporter 0.64 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB 0.67 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein low > 87
Pseudomonas fluorescens SBW25 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.66 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.66 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Shewanella oneidensis MR-1 0.66 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.32 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.33 Shewana3_3332 branched-chain amino acid transport system II carrier protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.66 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) 0.34 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.65 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.51 Psest_2489 branched-chain amino acid uptake carrier low > 67
Shewanella loihica PV-4 0.65 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) 0.37 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.58 MPMX26_00689 Multidrug resistance protein MexB 0.58 MPMX26_01263 Branched-chain amino acid transport system 2 carrier protein low > 36

Not shown: 40 genomes with orthologs for IAI47_14515 only; 3 genomes with orthologs for IAI47_14835 only