Conservation of cofitness between IAI47_03795 and IAI47_14830 in Pantoea sp. MT58

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_03795 hemolysin III family protein 1.0 IAI47_14830 proline-specific permease ProY 0.23 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.81 GFF4300 Proline-specific permease proY low > 78
Klebsiella michiganensis M5al 0.69 BWI76_RS23840 hemolysin III family protein 0.82 BWI76_RS06245 proline-specific permease ProY low > 92
Enterobacter sp. TBS_079 0.69 MPMX20_03758 hypothetical protein 0.81 MPMX20_00989 Proline-specific permease ProY low > 85
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2950 channel protein, hemolysin III family 0.82 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases low > 76
Escherichia coli ECRC101 0.69 MCAODC_10065 yqfA hemolysin III family protein 0.79 MCAODC_27755 proY proline-specific permease ProY — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_00816 hypothetical protein 0.79 OHPLBJKB_03274 Proline-specific permease ProY low > 73
Escherichia coli ECRC101 0.69 OKFHMN_19545 yqfA hemolysin III family protein 0.79 OKFHMN_08530 proY proline-specific permease ProY — —
Escherichia coli ECRC99 0.69 KEDOAH_08595 yqfA hemolysin III family protein 0.79 KEDOAH_19435 proY proline-specific permease ProY — —
Escherichia coli Nissle 1917 0.69 ECOLIN_RS16150 hemolysin III family protein 0.79 ECOLIN_RS02425 proline-specific permease ProY low > 52
Escherichia coli BL21 0.69 ECD_02731 hemolysin III family HylIII inner membrane protein 0.79 ECD_00350 proline-specific permease low > 60
Escherichia coli BW25113 0.69 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.79 b0402 proY predicted cryptic proline transporter (NCBI) low > 76
Escherichia coli ECOR27 0.69 NOLOHH_11465 yqfA hemolysin III family protein 0.79 NOLOHH_01460 proY proline-specific permease ProY low > 57
Escherichia coli ECRC62 0.69 BNILDI_10000 yqfA hemolysin III family protein 0.79 BNILDI_22875 proY proline-specific permease ProY — —
Escherichia coli ECOR38 0.69 HEPCGN_18835 yqfA hemolysin III family protein 0.79 HEPCGN_07170 proY proline-specific permease ProY low > 85
Escherichia coli ECRC98 0.69 JDDGAC_23185 yqfA hemolysin III family protein 0.79 JDDGAC_12185 proY proline-specific permease ProY — —
Escherichia coli ECRC102 0.69 NIAGMN_17310 yqfA hemolysin III family protein 0.79 NIAGMN_06585 proY proline-specific permease ProY — —
Escherichia fergusonii Becca 0.69 EFB2_01002 hypothetical protein 0.79 EFB2_03655 Proline-specific permease ProY low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS03270 hemolysin III family protein 0.81 DDA3937_RS05450 proline-specific permease ProY low > 74
Serratia liquefaciens MT49 0.67 IAI46_20775 hemolysin III family protein 0.82 IAI46_04800 proline-specific permease ProY low > 86
Rahnella sp. WP5 0.66 EX31_RS21610 hemolysin III family protein 0.83 EX31_RS22070 proline-specific permease ProY low > 89
Dickeya dianthicola 67-19 0.63 HGI48_RS03410 hemolysin III family protein 0.86 HGI48_RS05510 proline-specific permease ProY low > 71
Pectobacterium carotovorum WPP14 0.63 HER17_RS17935 hemolysin III family protein 0.80 HER17_RS16015 proline-specific permease ProY low > 75
Dickeya dianthicola ME23 0.63 DZA65_RS03455 hemolysin III family protein 0.86 DZA65_RS05835 proline-specific permease ProY low > 75
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_00475 yqfA putative membrane channel-forming protein YqfA, hemolysin III family 0.51 OKGIIK_09870 Amino acid permease low > 52
Rhodanobacter denitrificans MT42 0.38 LRK55_RS05890 hemolysin III family protein 0.52 LRK55_RS02640 amino acid permease low > 63
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS06145 hemolysin III family protein 0.52 LRK54_RS02890 amino acid permease low > 59
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS18160 hemolysin III family protein 0.60 ABZR86_RS05185 amino acid permease low > 74
Pseudomonas putida KT2440 0.34 PP_4986 Channel protein, hemolysin III family 0.64 PP_5031 proline (histidine) APC transporter low > 96
Pseudomonas simiae WCS417 0.34 PS417_26570 hemolysin III 0.65 PS417_01755 proline-specific permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28225 hemolysin III family protein 0.64 PFLU_RS01810 amino acid permease low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28225 hemolysin III family protein 0.64 PFLU_RS01810 amino acid permease low > 109
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS02015 hemolysin III family protein 0.59 ABZR87_RS09765 amino acid permease low > 80
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter low > 103
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_13560 hemolysin III 0.55 AO356_17670 L-alanine and D-alanine permease (from data) low > 104
Pseudomonas sp. RS175 0.33 PFR28_04213 hypothetical protein 0.57 PFR28_03490 Proline-specific permease ProY low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog 0.63 Pf1N1B4_1580 Histidine transport protein (permease) low > 87
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_08075 hemolysin III 0.63 AO353_12275 histidine permease (from data) low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0452 HylII 0.65 Psyr_4834 histidine:proton symporter, AAT family low > 86
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0452 HylII 0.65 Psyr_4834 histidine:proton symporter, AAT family low > 86
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog 0.63 PfGW456L13_318 Histidine transport protein (permease) low > 87
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS36990 hemolysin III 0.63 RR42_RS14635 proline-specific permease low > 128
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS14635 hemolysin III family protein 0.09 A4249_RS06560 amino acid permease low > 48

Not shown: 38 genomes with orthologs for IAI47_03795 only; 1 genomes with orthologs for IAI47_14830 only