Conservation of cofitness between IAI46_22445 and IAI46_20915 in Serratia liquefaciens MT49

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_22445 arabinose-5-phosphate isomerase KdsD 1.0 IAI46_20915 oxidative stress defense protein 0.56 3
Enterobacter sp. TBS_079 0.84 MPMX20_04103 Arabinose 5-phosphate isomerase KdsD 0.63 MPMX20_03774 26 kDa periplasmic immunogenic protein low > 85
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3251 KpsF/GutQ family protein 0.61 EX28DRAFT_2968 Uncharacterized conserved protein low > 76
Rahnella sp. WP5 0.83 EX31_RS12425 arabinose-5-phosphate isomerase KdsD 0.85 EX31_RS21445 oxidative stress defense protein — —
Pectobacterium carotovorum WPP14 0.82 HER17_RS20035 arabinose-5-phosphate isomerase KdsD 0.80 HER17_RS02710 oxidative stress defense protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF2941 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.65 GFF3017 Protein of unknown function DUF541 low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00503 Arabinose 5-phosphate isomerase KdsD 0.62 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein low > 73
Escherichia coli ECRC62 0.81 BNILDI_01770 kdsD arabinose-5-phosphate isomerase KdsD 0.62 BNILDI_09860 yggE oxidative stress defense protein low > 75
Escherichia coli ECRC99 0.81 KEDOAH_10185 kdsD arabinose-5-phosphate isomerase KdsD 0.62 KEDOAH_08725 yggE oxidative stress defense protein — —
Escherichia coli ECRC100 0.81 OKFHMN_17965 kdsD arabinose-5-phosphate isomerase KdsD 0.62 OKFHMN_19415 yggE oxidative stress defense protein low > 80
Escherichia coli ECOR38 0.81 HEPCGN_16840 kdsD arabinose-5-phosphate isomerase KdsD 0.62 HEPCGN_18720 yggE oxidative stress defense protein low > 87
Escherichia coli ECRC98 0.81 JDDGAC_21590 kdsD arabinose-5-phosphate isomerase KdsD 0.62 JDDGAC_23045 yggE oxidative stress defense protein low > 86
Escherichia coli ECRC101 0.81 MCAODC_08485 kdsD arabinose-5-phosphate isomerase KdsD 0.62 MCAODC_09935 yggE oxidative stress defense protein low > 87
Escherichia coli ECRC102 0.81 NIAGMN_15725 kdsD arabinose-5-phosphate isomerase KdsD 0.62 NIAGMN_17180 yggE oxidative stress defense protein — —
Escherichia coli BW25113 0.81 b3197 kdsD D-arabinose 5-phosphate isomerase (NCBI) 0.62 b2922 yggE hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.81 ECD_03062 D-arabinose 5-phosphate isomerase 0.62 ECD_02753 oxidative stress defense protein low > 61
Escherichia fergusonii Becca 0.81 EFB2_00626 Arabinose 5-phosphate isomerase KdsD 0.63 EFB2_00984 26 kDa periplasmic immunogenic protein low > 86
Escherichia coli ECOR27 0.81 NOLOHH_09765 kdsD arabinose-5-phosphate isomerase KdsD 0.62 NOLOHH_11325 yggE oxidative stress defense protein low > 75
Erwinia tracheiphila SCR3 0.81 LU632_RS21255 kdsD arabinose-5-phosphate isomerase KdsD 0.74 LU632_RS05840 oxidative stress defense protein — —
Escherichia coli Nissle 1917 0.81 ECOLIN_RS18400 arabinose-5-phosphate isomerase KdsD 0.62 ECOLIN_RS16240 oxidative stress defense protein low > 55
Klebsiella michiganensis M5al 0.80 BWI76_RS25240 D-arabinose 5-phosphate isomerase 0.66 BWI76_RS23960 oxidative stress defense protein low > 92
Dickeya dianthicola 67-19 0.80 HGI48_RS01470 arabinose-5-phosphate isomerase KdsD 0.75 HGI48_RS18420 oxidative stress defense protein — —
Dickeya dianthicola ME23 0.80 DZA65_RS01535 arabinose-5-phosphate isomerase KdsD 0.75 DZA65_RS19555 oxidative stress defense protein — —
Dickeya dadantii 3937 0.80 DDA3937_RS01555 arabinose-5-phosphate isomerase KdsD 0.80 DDA3937_RS18495 oxidative stress defense protein — —
Pantoea sp. MT58 0.79 IAI47_17160 arabinose-5-phosphate isomerase KdsD 0.73 IAI47_03710 oxidative stress defense protein — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_12790 KpsF/GutQ family sugar-phosphate isomerase 0.31 CSW01_02565 oxidative stress defense protein — —
Shewanella oneidensis MR-1 0.59 SO3956 carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) 0.28 SO4070 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.59 Shewana3_0677 KpsF/GutQ family protein (RefSeq) 0.29 Shewana3_3626 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.59 Sama_3083 arabinose-5-phosphate isomerase (RefSeq) 0.26 Sama_0486 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.58 Shew_3306 KpsF/GutQ family protein (RefSeq) 0.28 Shew_3168 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_00832 Arabinose 5-phosphate isomerase KdsD 0.14 MIT1002_02021 26 kDa periplasmic immunogenic protein precursor — —
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1667.1 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 0.14 Xcc-8004.1878.1 Protein of unknown function DUF541 — —
Lysobacter sp. OAE881 0.53 ABIE51_RS15930 KpsF/GutQ family sugar-phosphate isomerase 0.15 ABIE51_RS06775 SIMPL domain-containing protein — —
Agrobacterium fabrum C58 0.42 Atu3774 capsule expression protein 0.14 Atu2162 periplasmic immunogenic protein — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_3588 KpsF/GutQ family protein (RefSeq) 0.19 Dshi_0791 protein of unknown function DUF541 (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.41 PGA1_c36010 arabinose 5-phosphate isomerase KdsD 0.18 PGA1_c07630 Uncharacterized conserved protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_20105 D-arabinose 5-phosphate isomerase 0.20 CA264_08325 SIMPL domain-containing protein — —
Caulobacter crescentus NA1000 0.41 CCNA_02346 arabinose-5-phosphate isomerase 0.15 CCNA_02378 SIMPL family protein — —
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_02346 arabinose-5-phosphate isomerase 0.15 CCNA_02378 SIMPL family protein low > 67
Rhizobium sp. OAE497 0.40 ABIE40_RS16240 KpsF/GutQ family sugar-phosphate isomerase 0.16 ABIE40_RS12160 SIMPL domain-containing protein — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS08900 D-arabinose 5-phosphate isomerase 0.11 CA265_RS24045 SIMPL domain-containing protein low > 88

Not shown: 52 genomes with orthologs for IAI46_22445 only; 1 genomes with orthologs for IAI46_20915 only