Conservation of cofitness between HSERO_RS09035 and HSERO_RS23580 in Herbaspirillum seropedicae SmR1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09035 lysine transporter LysE 1.0 HSERO_RS23580 branched-chain amino acid ABC transporter substrate-binding protein 0.21 20
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3234 Lysine exporter protein (LYSE/YGGA) 0.83 Psyr_4426 amino acid/amide ABC transporter substrate-binding protein, HAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3234 Lysine exporter protein (LYSE/YGGA) 0.83 Psyr_4426 amino acid/amide ABC transporter substrate-binding protein, HAAT family low > 86
Sinorhizobium meliloti 1021 0.40 SMc01425 hypothetical protein 0.60 SM_b20605 branched-chain amino acid ABC transporter substrate-binding protein low > 103
Pseudomonas sp. S08-1 0.39 OH686_00600 Transporter, LysE family 0.82 OH686_07660 Urea ABC transporter, substrate-binding protein UrtA low > 80
Pseudomonas simiae WCS417 0.39 PS417_14335 lysine transporter LysE 0.82 PS417_02835 branched-chain amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens SBW25 0.39 PFLU_RS16225 LysE family translocator 0.82 PFLU_RS02905 urea ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS16225 LysE family translocator 0.82 PFLU_RS02905 urea ABC transporter substrate-binding protein low > 109
Pseudomonas putida KT2440 0.39 PP_3405 conserved membrane protein of unknown function 0.82 PP_4841 putative Urea ABC transporter, periplasmic protein low > 96
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_193 Transporter, LysE family 0.81 Pf1N1B4_1343 Urea ABC transporter, substrate binding protein UrtA low > 87
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_19400 lysine transporter LysE 0.82 AO353_13545 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_2315 Transporter, LysE family 0.82 PfGW456L13_81 Urea ABC transporter, substrate binding protein UrtA low > 87
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS18185 LysE family translocator 0.79 QEN71_RS25335 urea ABC transporter substrate-binding protein low > 153
Dinoroseobacter shibae DFL-12 0.36 Dshi_2478 Lysine exporter protein (LYSE/YGGA) (RefSeq) 0.59 Dshi_2695 putative ureashort-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor (RefSeq) low > 64
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17900 lysine transporter LysE 0.80 RR42_RS05630 branched-chain amino acid ABC transporter substrate-binding protein low > 128
Rhizobium sp. OAE497 0.35 ABIE40_RS11480 LysE family translocator 0.59 ABIE40_RS14665 urea ABC transporter substrate-binding protein 0.25 78
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_01576 Threonine/homoserine/homoserine lactone efflux protein 0.78 H281DRAFT_00094 amino acid/amide ABC transporter substrate-binding protein, HAAT family low > 103
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS21565 lysine transporter LysE 0.79 BPHYT_RS04640 branched-chain amino acid ABC transporter substrate-binding protein low > 109
Pseudomonas sp. RS175 0.32 PFR28_02911 Cysteine/O-acetylserine efflux protein 0.82 PFR28_05187 Aliphatic amidase expression-regulating protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_6076 Transporter, LysE family 0.82 Pf6N2E2_3547 Urea ABC transporter, substrate binding protein UrtA low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_20945 lysine transporter LysE 0.82 AO356_08340 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Rahnella sp. WP5 0.32 EX31_RS05815 LysE family translocator 0.82 EX31_RS05620 urea ABC transporter substrate-binding protein low > 89
Pantoea sp. MT58 0.29 IAI47_01990 LysE family translocator 0.81 IAI47_16280 urea ABC transporter substrate-binding protein low > 76
Pectobacterium carotovorum WPP14 0.29 HER17_RS01940 LysE family translocator 0.82 HER17_RS10240 urea ABC transporter substrate-binding protein low > 75
Pseudomonas stutzeri RCH2 0.29 Psest_1402 Putative threonine efflux protein 0.81 Psest_0567 urea ABC transporter, urea binding protein low > 67
Serratia liquefaciens MT49 0.28 IAI46_00170 LysE family translocator 0.80 IAI46_07225 urea ABC transporter substrate-binding protein low > 86
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3331 Putative threonine efflux protein 0.83 EX28DRAFT_1215 urea ABC transporter, urea binding protein low > 76
Variovorax sp. OAS795 0.22 ABID97_RS05630 LysE family translocator 0.79 ABID97_RS22565 urea ABC transporter substrate-binding protein low > 91
Variovorax sp. SCN45 0.22 GFF6887 Transporter, LysE family 0.79 GFF5799 Urea ABC transporter, substrate-binding protein UrtA low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF1750 Transporter, LysE family 0.77 GFF3275 Urea ABC transporter, substrate binding protein UrtA low > 90
Acidovorax sp. GW101-3H11 0.14 Ac3H11_1362 Transporter, LysE family 0.79 Ac3H11_3702 Urea ABC transporter, urea binding protein low > 79

Not shown: 29 genomes with orthologs for HSERO_RS09035 only; 12 genomes with orthologs for HSERO_RS23580 only