| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS10870 | | methionine aminopeptidase | 1.0 | HSERO_RS15070 | | ribosomal large subunit pseudouridine synthase D | 0.50 | 5 |
| Ralstonia solanacearum GMI1000 | 0.75 | RS_RS07040 | | type I methionyl aminopeptidase | 0.46 | RS_RS08205 | | RluA family pseudouridine synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.75 | ABZR87_RS11820 | | type I methionyl aminopeptidase | 0.44 | ABZR87_RS13315 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS17105 | | type I methionyl aminopeptidase | 0.45 | RPSI07_RS15970 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum UW163 | 0.75 | UW163_RS13700 | | type I methionyl aminopeptidase | 0.45 | UW163_RS14830 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.75 | RALBFv3_RS00370 | | type I methionyl aminopeptidase | 0.45 | RALBFv3_RS01520 | | RluA family pseudouridine synthase | — | — |
| Castellaniella sp019104865 MT123 | 0.66 | ABCV34_RS04115 | | type I methionyl aminopeptidase | 0.37 | ABCV34_RS01885 | | RluA family pseudouridine synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF4564 | | Methionine aminopeptidase (EC 3.4.11.18) | 0.31 | GFF4870 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 90 |
| Variovorax sp. OAS795 | 0.64 | ABID97_RS15670 | | type I methionyl aminopeptidase | 0.30 | ABID97_RS14190 | | RluA family pseudouridine synthase | — | — |
| Variovorax sp. SCN45 | 0.64 | GFF1323 | | Methionine aminopeptidase (EC 3.4.11.18) | 0.31 | GFF988 | | LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) | 0.52 | 13 |
| Pseudomonas sp. S08-1 | 0.64 | OH686_06490 | | methionine aminopeptidase, type I | 0.34 | OH686_16410 | | LSU rRNA pseudouridine(1911/1915/1917) synthase | — | — |
| Pseudomonas putida KT2440 | 0.64 | PP_1590 | | methionine aminopeptidase | 0.36 | PP_0623 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_1342 | | methionine aminopeptidase, type I | 0.35 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_1342 | | methionine aminopeptidase, type I | 0.35 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_01002 | | Methionine aminopeptidase | 0.35 | MIT1002_02679 | | Ribosomal large subunit pseudouridine synthase D | — | — |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS05205 | | type I methionyl aminopeptidase | 0.34 | BWI76_RS21450 | | 23S rRNA pseudouridine(1911/1915/1917) synthase | low | > 92 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS00920 | | type I methionyl aminopeptidase | 0.34 | ECOLIN_RS14675 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli ECRC62 | 0.58 | BNILDI_09095 | map | type I methionyl aminopeptidase | 0.34 | BNILDI_11730 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli BL21 | 0.58 | ECD_00166 | | methionine aminopeptidase | 0.34 | ECD_02484 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | — | — |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_17925 | map | type I methionyl aminopeptidase | 0.34 | KEDOAH_06970 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_03496 | | Methionine aminopeptidase | 0.34 | OHPLBJKB_01112 | | Ribosomal large subunit pseudouridine synthase D | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_10230 | map | type I methionyl aminopeptidase | 0.34 | OKFHMN_21250 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli ECRC101 | 0.58 | MCAODC_00745 | map | type I methionyl aminopeptidase | 0.34 | MCAODC_11780 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia fergusonii Becca | 0.58 | EFB2_03877 | | Methionine aminopeptidase | 0.34 | EFB2_01296 | | Ribosomal large subunit pseudouridine synthase D | — | — |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_08180 | map | type I methionyl aminopeptidase | 0.34 | HEPCGN_20375 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli BW25113 | 0.58 | b0168 | map | methionine aminopeptidase (NCBI) | 0.34 | b2594 | rluD | 23S rRNA pseudouridine synthase (NCBI) | — | — |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_08080 | map | type I methionyl aminopeptidase | 0.34 | NIAGMN_19020 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_02575 | map | type I methionyl aminopeptidase | 0.34 | NOLOHH_12925 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_13825 | map | type I methionyl aminopeptidase | 0.34 | JDDGAC_24915 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Acinetobacter radioresistens SK82 | 0.57 | MPMX26_02113 | | Methionine aminopeptidase | 0.30 | MPMX26_00735 | | Ribosomal large subunit pseudouridine synthase D | low | > 36 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF54 | | Methionine aminopeptidase (EC 3.4.11.18) | 0.33 | GFF4182 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_3755 | | methionine aminopeptidase, type I | 0.34 | EX28DRAFT_2695 | | pseudouridine synthase, RluA family | — | — |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS05450 | | type I methionyl aminopeptidase | 0.34 | DZA65_RS17330 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS05110 | | type I methionyl aminopeptidase | 0.34 | DDA3937_RS16110 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_00852 | | Methionine aminopeptidase | 0.34 | MPMX20_03463 | | Ribosomal large subunit pseudouridine synthase D | — | — |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS19975 | map | type I methionyl aminopeptidase | 0.34 | LU632_RS16945 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Pantoea sp. MT58 | 0.56 | IAI47_15535 | | type I methionyl aminopeptidase | 0.33 | IAI47_04425 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS16340 | | type I methionyl aminopeptidase | 0.33 | HER17_RS05400 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Serratia liquefaciens MT49 | 0.55 | IAI46_20265 | | type I methionyl aminopeptidase | 0.34 | IAI46_03985 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 86 |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS05110 | | type I methionyl aminopeptidase | 0.34 | HGI48_RS16235 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Rahnella sp. WP5 | 0.55 | EX31_RS13040 | | type I methionyl aminopeptidase | 0.34 | EX31_RS07570 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 89 |
| Azospirillum sp. SherDot2 | 0.53 | MPMX19_00187 | | Methionine aminopeptidase | 0.29 | MPMX19_05442 | | Ribosomal large subunit pseudouridine synthase D | low | > 112 |
| Magnetospirillum magneticum AMB-1 | 0.53 | AMB_RS08090 | | type I methionyl aminopeptidase | 0.31 | AMB_RS16095 | | RluA family pseudouridine synthase | — | — |
| Caulobacter crescentus NA1000 | 0.52 | CCNA_02759 | | methionine aminopeptidase | 0.29 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.52 | CCNA_02759 | | methionine aminopeptidase | 0.29 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.51 | CSW01_11515 | | type I methionyl aminopeptidase | 0.31 | CSW01_03695 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS00520 | | type I methionyl aminopeptidase | 0.26 | A4249_RS10060 | | RluA family pseudouridine synthase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_3390 | | methionine aminopeptidase, type I | 0.31 | Ga0059261_0664 | | pseudouridine synthase, RluA family | low | > 68 |
| Sinorhizobium meliloti 1021 | 0.47 | SMc00298 | | methionine aminopeptidase | 0.29 | SMc00647 | | ribosomal large subunit pseudouridine synthase | low | > 103 |
| Parabacteroides merdae CL09T00C40 | 0.46 | HMPREF1078_RS10540 | | type I methionyl aminopeptidase | 0.27 | HMPREF1078_RS12640 | | RluA family pseudouridine synthase | low | > 61 |
| Fusobacterium nucleatum SB010 | 0.38 | HUW76_03750 | | type I methionyl aminopeptidase | 0.25 | HUW76_08575 | | RluA family pseudouridine synthase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.35 | Echvi_0234 | | methionine aminopeptidase, type I | 0.34 | Echvi_0642 | | pseudouridine synthase, RluA family | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.35 | CA264_19450 | | type I methionyl aminopeptidase | 0.30 | CA264_15205 | | RNA pseudouridine synthase | low | > 74 |
Not shown: 39 genomes with orthologs for HSERO_RS10870 only; 8 genomes with orthologs for HSERO_RS15070 only