Conservation of cofitness between HSERO_RS22470 and HSERO_RS11065 in Herbaspirillum seropedicae SmR1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22470 D-xylose ABC transporter permease 1.0 HSERO_RS11065 quinolinate synthetase 0.33 20
Pseudomonas simiae WCS417 0.74 PS417_10930 D-xylose ABC transporter permease 0.57 PS417_22385 quinolinate synthase A low > 88
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS11290 sugar ABC transporter permease 0.57 PFLU_RS24025 quinolinate synthase NadA low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS11290 sugar ABC transporter permease 0.57 PFLU_RS24025 quinolinate synthase NadA low > 109
Pseudomonas sp. RS175 0.71 PFR28_02351 Xylose transport system permease protein XylH 0.57 PFR28_03388 Quinolinate synthase A low > 88
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH 0.57 Pf6N2E2_5553 Quinolinate synthetase (EC 2.5.1.72) low > 103
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.59 Psyr_1542 quinolinate synthetase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_2886 xylose ABC transporter membrane protein 0.59 Psyr_1542 quinolinate synthetase low > 86
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_28515 sugar ABC transporter permease 0.57 AO356_18145 quinolinate synthase A low > 104
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS25860 sugar ABC transporter permease 0.75 QEN71_RS03060 quinolinate synthase NadA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_03879 xylose ABC transporter membrane protein 0.73 H281DRAFT_04071 quinolinate synthetase low > 103
Paraburkholderia graminis OAS925 0.64 ABIE53_004932 D-xylose transport system permease protein 0.73 ABIE53_003294 quinolinate synthase low > 113
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS32810 xylose ABC transporter permease 0.74 BPHYT_RS15650 quinolinate synthetase low > 109
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS18230 sugar ABC transporter permease 0.83 ABZR87_RS00355 quinolinate synthase NadA low > 80
Ralstonia solanacearum UW163 0.51 UW163_RS16745 sugar ABC transporter permease 0.81 UW163_RS08935 quinolinate synthase NadA — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS23495 sugar ABC transporter permease 0.81 RALBFv3_RS04735 quinolinate synthase NadA — —
Serratia liquefaciens MT49 0.51 IAI46_00295 sugar ABC transporter permease 0.58 IAI46_06380 quinolinate synthase NadA low > 86
Ralstonia solanacearum PSI07 0.50 RPSI07_RS07645 sugar ABC transporter permease 0.81 RPSI07_RS12650 quinolinate synthase NadA low > 81
Rahnella sp. WP5 0.50 EX31_RS09750 sugar ABC transporter permease 0.55 EX31_RS23525 quinolinate synthase NadA low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS21070 sugar ABC transporter permease 0.58 HER17_RS14820 quinolinate synthase NadA low > 75
Ralstonia solanacearum GMI1000 0.49 RS_RS24955 sugar ABC transporter permease 0.81 RS_RS12295 quinolinate synthase low > 80
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3833 ABC-type xylose transport system, permease component 0.57 EX28DRAFT_2245 quinolinate synthetase (EC 2.5.1.72) low > 76
Pantoea sp. MT58 0.48 IAI47_00180 sugar ABC transporter permease 0.57 IAI47_13635 quinolinate synthase NadA low > 76
Dickeya dadantii 3937 0.48 DDA3937_RS20920 sugar ABC transporter permease 0.57 DDA3937_RS06545 quinolinate synthase NadA low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS00325 sugar ABC transporter permease 0.57 DZA65_RS06945 quinolinate synthase NadA low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS00325 sugar ABC transporter permease 0.57 HGI48_RS06595 quinolinate synthase NadA low > 71
Enterobacter sp. TBS_079 0.48 MPMX20_00162 Xylose transport system permease protein XylH 0.56 MPMX20_01377 Quinolinate synthase A low > 85
Klebsiella michiganensis M5al 0.47 BWI76_RS27040 xylose ABC transporter permease 0.56 BWI76_RS08580 quinolinate synthetase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00136 Xylose transport system permease protein XylH 0.57 OHPLBJKB_02963 Quinolinate synthase A low > 73
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20405 xylose ABC transporter permease XylH 0.57 ECOLIN_RS03990 quinolinate synthase NadA low > 55
Escherichia coli ECRC102 0.46 NIAGMN_13700 xylH xylose ABC transporter permease XylH 0.57 NIAGMN_04810 nadA quinolinate synthase NadA — —
Escherichia coli ECRC98 0.46 JDDGAC_19570 xylH xylose ABC transporter permease XylH 0.57 JDDGAC_10415 nadA quinolinate synthase NadA low > 86
Escherichia coli ECRC101 0.46 MCAODC_06455 xylH xylose ABC transporter permease XylH 0.57 MCAODC_25980 nadA quinolinate synthase NadA low > 87
Escherichia fergusonii Becca 0.46 EFB2_00239 Xylose transport system permease protein XylH 0.57 EFB2_03356 Quinolinate synthase A low > 86
Escherichia coli ECOR27 0.46 NOLOHH_07885 xylH xylose ABC transporter permease XylH 0.57 NOLOHH_23190 nadA quinolinate synthase NadA low > 75
Escherichia coli BL21 0.46 ECD_03420 D-xylose ABC transporter permease 0.57 ECD_00703 quinolinate synthase, subunit A low > 61
Escherichia coli ECRC99 0.46 KEDOAH_12210 xylH xylose ABC transporter permease XylH 0.57 KEDOAH_21205 nadA quinolinate synthase NadA — —
Escherichia coli ECRC62 0.46 BNILDI_03660 xylH xylose ABC transporter permease XylH 0.57 BNILDI_21185 nadA quinolinate synthase NadA low > 75
Escherichia coli ECRC100 0.46 OKFHMN_15940 xylH xylose ABC transporter permease XylH 0.57 OKFHMN_06760 nadA quinolinate synthase NadA 0.74 17
Escherichia coli ECOR38 0.46 HEPCGN_14825 xylH xylose ABC transporter permease XylH 0.57 HEPCGN_01515 nadA quinolinate synthase NadA low > 87
Escherichia coli BW25113 0.46 b3568 xylH D-xylose transporter subunit (NCBI) 0.57 b0750 nadA quinolinate synthetase (NCBI) low > 76

Not shown: 1 genomes with orthologs for HSERO_RS22470 only; 52 genomes with orthologs for HSERO_RS11065 only