Conservation of cofitness between HSERO_RS11215 and HSERO_RS04630 in Herbaspirillum seropedicae SmR1

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11215 methionine sulfoxide reductase B 1.0 HSERO_RS04630 3-hydroxy-2-methylbutyryl-CoA dehydrogenase 0.31 16
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00913 peptide-methionine (R)-S-oxide reductase 0.62 H281DRAFT_06131 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family low > 103
Paraburkholderia graminis OAS925 0.68 ABIE53_002148 peptide-methionine (R)-S-oxide reductase 0.62 ABIE53_005415 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) low > 113
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS11165 methionine sulfoxide reductase B 0.58 RR42_RS25375 3-hydroxy-2-methylbutyryl-CoA dehydrogenase low > 128
Sinorhizobium meliloti 1021 0.62 SMc00117 hypothetical protein 0.59 SMa1452 hypothetical protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_19155 peptide methionine sulfoxide reductase 0.55 AO353_25690 3-hydroxy-2-methylbutyryl-CoA dehydrogenase — —
Acinetobacter radioresistens SK82 0.60 MPMX26_01870 Peptide methionine sulfoxide reductase MsrB 0.59 MPMX26_01177 putative oxidoreductase — —
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS11250 peptide-methionine (R)-S-oxide reductase MsrB 0.51 ABZR86_RS08630 SDR family NAD(P)-dependent oxidoreductase low > 74
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_260 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.57 Pf1N1B4_4785 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) — —
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2445 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.55 Pf6N2E2_1144 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) — —
Rhodopseudomonas palustris CGA009 0.60 TX73_021075 peptide-methionine (R)-S-oxide reductase MsrB 0.63 TX73_011910 3-hydroxyacyl-CoA dehydrogenase 0.23 79
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_03085 peptide methionine sulfoxide reductase 0.56 AO356_26345 3-hydroxy-2-methylbutyryl-CoA dehydrogenase low > 104
Pseudomonas putida KT2440 0.59 PP_1873 Peptide methionine sulfoxide reductase MsrB 0.58 PP_2214 3-hydroxyacyl-CoA dehydrogenase type-2 low > 96
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_2253 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 0.57 PfGW456L13_2981 Probable acyl-CoA dehydrogenase (EC 1.3.99.3) low > 87
Pseudomonas sp. RS175 0.58 PFR28_00985 Peptide methionine sulfoxide reductase MsrB 0.56 PFR28_01881 putative oxidoreductase low > 88
Pseudomonas stutzeri RCH2 0.58 Psest_1773 methionine-R-sulfoxide reductase 0.55 Psest_2447 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 67
Pseudomonas simiae WCS417 0.57 PS417_08565 peptide methionine sulfoxide reductase 0.55 PS417_13860 3-hydroxy-2-methylbutyryl-CoA dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.57 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS08515 peptide-methionine (R)-S-oxide reductase MsrB 0.57 PFLU_RS14760 SDR family NAD(P)-dependent oxidoreductase low > 109
Dinoroseobacter shibae DFL-12 0.56 Dshi_1706 methionine-R-sulfoxide reductase (RefSeq) 0.50 Dshi_1700 short-chain dehydrogenase/reductase SDR (RefSeq) low > 64
Pseudomonas sp. S08-1 0.56 OH686_22580 Peptide-methionine (R)-S-oxide reductase MsrB 0.61 OH686_00865 3-hydroxyacyl-CoA dehydrogenase or 17hydroxysteroid dehydrogenase type 10 (HSD10)-like low > 80
Shewanella sp. ANA-3 0.54 Shewana3_4333 methionine-R-sulfoxide reductase (RefSeq) 0.25 Shewana3_2765 fabG 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_02396 Peptide methionine sulfoxide reductase MsrB 0.47 MIT1002_01862 Levodione reductase low > 70
Mycobacterium tuberculosis H37Rv 0.48 Rv2674 Probable peptide methionine sulfoxide reductase MsrB (protein-methionine-R-oxide reductase) (peptide met(O) reductase) 0.49 Rv1144 Probable short-chain type dehydrogenase/reductase low > 58

Not shown: 52 genomes with orthologs for HSERO_RS11215 only; 9 genomes with orthologs for HSERO_RS04630 only