Conservation of cofitness between HGI48_RS06620 and HGI48_RS15305 in Dickeya dianthicola 67-19

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS06620 galactose-1-epimerase 1.0 HGI48_RS15305 TIGR01666 family membrane protein 0.65 10
Dickeya dianthicola ME23 0.98 DZA65_RS06975 galactose-1-epimerase 1.00 DZA65_RS16130 TIGR01666 family membrane protein low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS06600 galactose-1-epimerase 0.95 DDA3937_RS15230 TIGR01666 family membrane protein low > 74
Pectobacterium carotovorum WPP14 0.67 HER17_RS14770 galactose-1-epimerase 0.72 HER17_RS08435 YccS family putative transporter low > 75
Serratia liquefaciens MT49 0.63 IAI46_06420 galactose-1-epimerase 0.69 IAI46_08890 TIGR01666 family membrane protein low > 86
Rahnella sp. WP5 0.58 EX31_RS23565 galactose-1-epimerase 0.64 EX31_RS18025 TIGR01666 family membrane protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF649 Aldose 1-epimerase (EC 5.1.3.3) 0.65 GFF3251 Putative efflux (PET) family inner membrane protein YccS low > 78
Escherichia coli ECOR38 0.57 HEPCGN_01545 galM galactose-1-epimerase 0.65 HEPCGN_23300 yccS Inner membrane protein YccS low > 87
Escherichia coli BW25113 0.57 b0756 galM galactose-1-epimerase (mutarotase) (NCBI) 0.65 b0960 b0960 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.57 NOLOHH_23160 galM galactose-1-epimerase 0.65 NOLOHH_21775 yccS Inner membrane protein YccS low > 75
Escherichia coli ECRC62 0.57 BNILDI_21155 galM galactose-1-epimerase 0.65 BNILDI_19940 yccS Inner membrane protein YccS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02957 Aldose 1-epimerase 0.65 OHPLBJKB_02706 Inner membrane protein YccS low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS04025 galactose-1-epimerase 0.65 ECOLIN_RS05045 YccS family putative transporter — —
Escherichia fergusonii Becca 0.57 EFB2_03350 Aldose 1-epimerase 0.65 EFB2_03111 Inner membrane protein YccS low > 86
Escherichia coli ECRC102 0.57 NIAGMN_04780 galM galactose-1-epimerase 0.65 NIAGMN_02940 yccS Inner membrane protein YccS — —
Escherichia coli ECRC100 0.57 OKFHMN_06730 galM galactose-1-epimerase 0.65 OKFHMN_05220 yccS Inner membrane protein YccS low > 80
Escherichia coli ECRC98 0.57 JDDGAC_10385 galM galactose-1-epimerase 0.65 JDDGAC_08830 yccS Inner membrane protein YccS low > 86
Pantoea sp. MT58 0.57 IAI47_13595 galactose-1-epimerase 0.60 IAI47_12630 TIGR01666 family membrane protein low > 76
Escherichia coli ECRC99 0.57 KEDOAH_21235 galM galactose-1-epimerase 0.65 KEDOAH_22515 yccS Inner membrane protein YccS — —
Escherichia coli ECRC101 0.57 MCAODC_25950 galM galactose-1-epimerase 0.65 MCAODC_24610 yccS Inner membrane protein YccS low > 87
Klebsiella michiganensis M5al 0.56 BWI76_RS08610 galactose-1-epimerase 0.65 BWI76_RS09985 membrane protein low > 92
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2239 galactose mutarotase 0.67 EX28DRAFT_1983 TIGR01666 family membrane protein low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01383 Aldose 1-epimerase 0.67 MPMX20_01610 Inner membrane protein YccS low > 85
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_07995 galactose-1-epimerase 0.38 CSW01_17765 TIGR01666 family membrane protein 0.38 61
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS08330 galactose-1-epimerase 0.13 CA265_RS09455 FUSC family protein low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0697 Aldose 1-epimerase (EC 5.1.3.3) (from data) 0.14 Echvi_1920 Predicted membrane protein low > 79
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS01235 aldose epimerase family protein 0.25 ABZR86_RS20530 YccS family putative transporter low > 74
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS18210 aldose epimerase family protein 0.09 ABZR87_RS02175 FUSC family protein low > 80
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS22450 aldose 1-epimerase 0.10 HSERO_RS10560 membrane protein low > 78
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2369 aldose 1-epimerase 0.31 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2369 aldose 1-epimerase 0.31 Psyr_0514 Intergral membrane protein, YccS:Integral membrane protein, YccS/YhfK low > 86
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_84 Aldose 1-epimerase (EC 5.1.3.3) 0.32 Pf1N1B4_2410 FIG00956403: hypothetical protein low > 87
Pseudomonas sp. RS175 0.25 PFR28_01305 Aldose 1-epimerase 0.32 PFR28_04174 Inner membrane protein YccS low > 88
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS11665 galactose mutarotase 0.32 PFLU_RS28030 TIGR01666 family membrane protein low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS11665 galactose mutarotase 0.32 PFLU_RS28030 TIGR01666 family membrane protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_01315 aldose epimerase 0.32 AO356_13760 hypothetical protein low > 104
Pseudomonas simiae WCS417 0.24 PS417_11040 aldose epimerase 0.32 PS417_26380 YccS/YhfK family integral membrane protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_2135 Aldose 1-epimerase (EC 5.1.3.3) 0.31 Pf6N2E2_4671 FIG00956403: hypothetical protein low > 103
Variovorax sp. OAS795 0.23 ABID97_RS06780 aldose epimerase family protein 0.06 ABID97_RS20740 FUSC family membrane protein low > 91
Variovorax sp. SCN45 0.22 GFF5187 Aldose 1-epimerase (EC 5.1.3.3) 0.26 GFF2446 FIG00956403: hypothetical protein low > 127
Xanthomonas campestris pv. campestris strain 8004 0.21 Xcc-8004.3776.1 Aldose 1-epimerase (EC 5.1.3.3) 0.28 Xcc-8004.656.1 FIG01209718: hypothetical protein low > 74

Not shown: 31 genomes with orthologs for HGI48_RS06620 only; 9 genomes with orthologs for HGI48_RS15305 only