| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS05050 | | recombination regulator RecX | 1.0 | HER17_RS19810 | | 3',5'-cyclic-AMP phosphodiesterase | 0.71 | 8 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS17445 | | recombination regulator RecX | 0.81 | DZA65_RS01725 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS16350 | | recombination regulator RecX | 0.81 | HGI48_RS01650 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 71 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS16240 | | recombination regulator RecX | 0.83 | DDA3937_RS01755 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 74 |
| Serratia liquefaciens MT49 | 0.54 | IAI46_03845 | | recombination regulator RecX | 0.83 | IAI46_21930 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 86 |
| Rahnella sp. WP5 | 0.49 | EX31_RS07795 | | recombination regulator RecX | 0.81 | EX31_RS25975 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 89 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_07425 | recX | recombination regulator RecX | 0.69 | KEDOAH_09325 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_24375 | recX | recombination regulator RecX | 0.69 | JDDGAC_22455 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS15055 | | recombination regulator RecX | 0.69 | ECOLIN_RS17500 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 55 |
| Escherichia coli BL21 | 0.47 | ECD_02548 | | regulatory protein for RecA | 0.69 | ECD_02904 | | 3',5' cAMP phosphodiesterase | low | > 61 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_11235 | recX | recombination regulator RecX | 0.69 | MCAODC_09335 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_01036 | | Regulatory protein RecX | 0.69 | OHPLBJKB_00671 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | low | > 73 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_12550 | recX | recombination regulator RecX | 0.69 | NOLOHH_10625 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 75 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_18480 | recX | recombination regulator RecX | 0.69 | NIAGMN_16585 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Escherichia coli BW25113 | 0.47 | b2698 | recX | RecA regulator RecX (NCBI) | 0.69 | b3032 | cpdA | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_20710 | recX | recombination regulator RecX | 0.69 | OKFHMN_18820 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 80 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_11110 | recX | recombination regulator RecX | 0.69 | BNILDI_00890 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.47 | MPMX20_03579 | | Regulatory protein RecX | 0.67 | MPMX20_03879 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 85 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_19905 | recX | recombination regulator RecX | 0.69 | HEPCGN_17695 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 87 |
| Escherichia fergusonii Becca | 0.47 | EFB2_01226 | | Regulatory protein RecX | 0.69 | EFB2_00776 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 86 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_2784 | | Uncharacterized protein conserved in bacteria | 0.68 | EX28DRAFT_3070 | | Predicted phosphohydrolases | low | > 76 |
| Pantoea sp. MT58 | 0.45 | IAI47_04305 | | regulatory protein RecX | 0.72 | IAI47_03150 | | 3',5'-cyclic-AMP phosphodiesterase | 0.16 | 66 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.43 | GFF4692 | | Regulatory protein RecX | 0.70 | GFF3146 | | '3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11 | low | > 78 |
| Klebsiella michiganensis M5al | 0.43 | BWI76_RS22175 | | recombination regulator RecX | 0.73 | BWI76_RS24385 | | phosphodiesterase | — | — |
| Erwinia tracheiphila SCR3 | 0.40 | LU632_RS15730 | | recombination regulator RecX | 0.71 | LU632_RS20620 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.26 | OH686_18210 | | Regulatory protein RecX | 0.39 | OH686_15825 | | 3',5'-cyclic-nucleotide phosphodiesterase | — | — |
| Shewanella loihica PV-4 | 0.25 | Shew_1216 | | regulatory protein RecX (RefSeq) | 0.40 | Shew_0547 | | calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.24 | CSW01_02880 | | regulatory protein RecX | 0.47 | CSW01_12320 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_4667 | | Regulatory protein RecX | 0.41 | PfGW456L13_180 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas simiae WCS417 | 0.24 | PS417_05820 | | recombinase RecX | 0.40 | PS417_02380 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS05890 | | recombination regulator RecX | 0.38 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS05890 | | recombination regulator RecX | 0.38 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_05665 | | recombinase RecX | 0.41 | AO356_08785 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.23 | Pf1N1B4_3144 | | Regulatory protein RecX | 0.40 | Pf1N1B4_1442 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_16810 | | recombinase RecX | 0.40 | AO353_13035 | | serine/threonine protein phosphatase | — | — |
| Pseudomonas sp. RS175 | 0.23 | PFR28_00473 | | Regulatory protein RecX | 0.40 | PFR28_05096 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_2992 | | Regulatory protein RecX | 0.41 | Pf6N2E2_3639 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | — | — |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_2871 | | Uncharacterized protein conserved in bacteria | 0.34 | Psest_0481 | | Predicted phosphohydrolases | — | — |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_1532 | | Uncharacterized protein conserved in bacteria | 0.32 | B158DRAFT_0977 | | Predicted phosphohydrolases | low | > 40 |
| Pseudomonas syringae pv. syringae B728a | 0.22 | Psyr_1379 | | Regulatory protein RecX | 0.38 | Psyr_0549 | | Metallophosphoesterase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.22 | Psyr_1379 | | Regulatory protein RecX | 0.38 | Psyr_0549 | | Metallophosphoesterase | — | — |
| Pseudomonas putida KT2440 | 0.22 | PP_1630 | | Regulatory protein RecX | 0.35 | PP_4917 | | 3',5'-cyclic-nucleotide phosphodiesterase | low | > 96 |
| Shewanella amazonensis SB2B | 0.21 | Sama_1047 | | hypothetical protein (RefSeq) | 0.38 | Sama_3045 | | lacZ expression regulator (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.21 | MPMX26_01307 | | Regulatory protein RecX | 0.27 | MPMX26_00178 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | low | > 36 |
| Ralstonia solanacearum GMI1000 | 0.17 | RS_RS02765 | | regulatory protein RecX | 0.18 | RS_RS19730 | | phosphohydrolase | low | > 80 |
Not shown: 8 genomes with orthologs for HER17_RS05050 only; 7 genomes with orthologs for HER17_RS19810 only