Conservation of cofitness between HER17_RS05050 and HER17_RS16000 in Pectobacterium carotovorum WPP14

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05050 recombination regulator RecX 1.0 HER17_RS16000 ACP phosphodiesterase 0.67 20
Dickeya dianthicola ME23 0.57 DZA65_RS17445 recombination regulator RecX 0.79 DZA65_RS05845 DUF479 domain-containing protein low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16350 recombination regulator RecX 0.79 HGI48_RS05520 DUF479 domain-containing protein low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS16240 recombination regulator RecX 0.78 DDA3937_RS05460 DUF479 domain-containing protein low > 74
Serratia liquefaciens MT49 0.54 IAI46_03845 recombination regulator RecX 0.71 IAI46_04830 DUF479 domain-containing protein low > 86
Rahnella sp. WP5 0.49 EX31_RS07795 recombination regulator RecX 0.71 EX31_RS22085 DUF479 domain-containing protein low > 89
Escherichia coli ECRC102 0.47 NIAGMN_18480 recX recombination regulator RecX 0.56 NIAGMN_06570 acpH ACP phosphodiesterase — —
Escherichia coli ECRC101 0.47 MCAODC_11235 recX recombination regulator RecX 0.56 MCAODC_27740 acpH ACP phosphodiesterase low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15055 recombination regulator RecX 0.56 ECOLIN_RS02435 ACP phosphodiesterase low > 55
Escherichia coli BW25113 0.47 b2698 recX RecA regulator RecX (NCBI) 0.56 b0404 yajB hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.47 NOLOHH_12550 recX recombination regulator RecX 0.56 NOLOHH_01450 acpH ACP phosphodiesterase low > 75
Escherichia coli ECRC99 0.47 KEDOAH_07425 recX recombination regulator RecX 0.56 KEDOAH_19450 acpH ACP phosphodiesterase — —
Escherichia coli BL21 0.47 ECD_02548 regulatory protein for RecA 0.56 ECD_00352 acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase low > 61
Escherichia coli ECRC98 0.47 JDDGAC_24375 recX recombination regulator RecX 0.56 JDDGAC_12170 acpH ACP phosphodiesterase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01036 Regulatory protein RecX 0.56 OHPLBJKB_03272 Acyl carrier protein phosphodiesterase low > 73
Escherichia coli ECRC100 0.47 OKFHMN_20710 recX recombination regulator RecX 0.56 OKFHMN_08515 acpH ACP phosphodiesterase low > 80
Escherichia coli ECRC62 0.47 BNILDI_11110 recX recombination regulator RecX 0.56 BNILDI_22865 acpH ACP phosphodiesterase low > 75
Enterobacter sp. TBS_079 0.47 MPMX20_03579 Regulatory protein RecX 0.57 MPMX20_00995 Acyl carrier protein phosphodiesterase low > 85
Escherichia fergusonii Becca 0.47 EFB2_01226 Regulatory protein RecX 0.57 EFB2_03653 Acyl carrier protein phosphodiesterase low > 86
Escherichia coli ECOR38 0.47 HEPCGN_19905 recX recombination regulator RecX 0.56 HEPCGN_07155 acpH ACP phosphodiesterase low > 87
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria 0.56 EX28DRAFT_2567 Uncharacterized protein conserved in bacteria low > 76
Pantoea sp. MT58 0.45 IAI47_04305 regulatory protein RecX 0.55 IAI47_14815 DUF479 domain-containing protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4692 Regulatory protein RecX 0.54 GFF4303 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS22175 recombination regulator RecX 0.52 BWI76_RS06290 ACP phosphodiesterase — —
Erwinia tracheiphila SCR3 0.40 LU632_RS15730 recombination regulator RecX 0.48 LU632_RS18480 ACP phosphodiesterase low > 74
Shewanella loihica PV-4 0.25 Shew_1216 regulatory protein RecX (RefSeq) 0.24 Shew_2339 hypothetical protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_02880 regulatory protein RecX 0.40 CSW01_18025 ACP phosphodiesterase low > 62
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4667 Regulatory protein RecX 0.28 PfGW456L13_4575 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 87
Pseudomonas simiae WCS417 0.24 PS417_05820 recombinase RecX 0.28 PS417_06800 ACP phosphodiesterase low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS05890 recombination regulator RecX 0.29 PFLU_RS06860 DUF479 domain-containing protein — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS05890 recombination regulator RecX 0.29 PFLU_RS06860 DUF479 domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_05665 recombinase RecX 0.28 AO356_04845 ACP phosphodiesterase — —
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3144 Regulatory protein RecX 0.28 Pf1N1B4_3253 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16810 recombinase RecX 0.28 AO353_24400 ACP phosphodiesterase low > 101
Pseudomonas sp. RS175 0.23 PFR28_00473 Regulatory protein RecX 0.28 PFR28_00638 Acyl carrier protein phosphodiesterase low > 88
Pseudomonas stutzeri RCH2 0.23 Psest_2871 Uncharacterized protein conserved in bacteria 0.30 Psest_3200 Uncharacterized protein conserved in bacteria — —
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2992 Regulatory protein RecX 0.27 Pf6N2E2_2817 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 103
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1379 Regulatory protein RecX 0.29 Psyr_4050 Protein of unknown function DUF479 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1379 Regulatory protein RecX 0.29 Psyr_4050 Protein of unknown function DUF479 — —
Pseudomonas putida KT2440 0.22 PP_1630 Regulatory protein RecX 0.28 PP_0922 conserved protein of unknown function low > 96
Shewanella amazonensis SB2B 0.21 Sama_1047 hypothetical protein (RefSeq) 0.22 Sama_2195 hypothetical protein (RefSeq) low > 62
Dechlorosoma suillum PS 0.18 Dsui_0706 hypothetical protein 0.24 Dsui_2775 hypothetical protein low > 51

Not shown: 11 genomes with orthologs for HER17_RS05050 only; 10 genomes with orthologs for HER17_RS16000 only