Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS00785 | | agmatine deiminase | 1.0 | HER17_RS14950 | | succinate dehydrogenase cytochrome b556 subunit | 0.61 | 14 |
Dickeya dadantii 3937 | 0.82 | DDA3937_RS00855 | | agmatine deiminase | 0.83 | DDA3937_RS06440 | | succinate dehydrogenase cytochrome b556 subunit | low | > 74 |
Dickeya dianthicola 67-19 | 0.80 | HGI48_RS20520 | | agmatine deiminase | 0.83 | HGI48_RS06480 | | succinate dehydrogenase cytochrome b556 subunit | low | > 71 |
Dickeya dianthicola ME23 | 0.79 | DZA65_RS21565 | | agmatine deiminase | 0.80 | DZA65_RS06825 | | succinate dehydrogenase cytochrome b556 subunit | low | > 75 |
Shewanella amazonensis SB2B | 0.69 | Sama_2521 | | agmatine deiminase (RefSeq) | 0.58 | Sama_1423 | | succinate dehydrogenase, cytochrome b556 subunit (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.68 | Shewana3_3465 | | agmatine deiminase (RefSeq) | 0.62 | Shewana3_1706 | | succinate dehydrogenase subunit C (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.68 | SO_0887 | | agmatine deiminase (RefSeq) | 0.60 | SO1927 | sdhC | succinate dehydrogenase, cytochrome b556 subunit (NCBI ptt file) | — | — |
Rahnella sp. WP5 | 0.67 | EX31_RS21180 | | agmatine deiminase | 0.75 | EX31_RS23420 | | succinate dehydrogenase cytochrome b556 subunit | low | > 89 |
Pseudomonas sp. RS175 | 0.55 | PFR28_04897 | | Agmatine deiminase | 0.51 | PFR28_03100 | | Succinate dehydrogenase cytochrome b556 subunit | — | — |
Pseudomonas putida KT2440 | 0.55 | PP_0266 | | Agmatine deiminase | 0.50 | PP_4193 | | succinate dehydrogenase membrane b-556 subunit | — | — |
Pseudomonas simiae WCS417 | 0.55 | PS417_01340 | | agmatine deiminase | 0.50 | PS417_08875 | | succinate dehydrogenase | — | — |
Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS01435 | | agmatine deiminase | 0.49 | PFLU_RS08935 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS01435 | | agmatine deiminase | 0.49 | PFLU_RS08935 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_10030 | | Agmatine deiminase (EC 3.5.3.12) (from data) | 0.51 | AO356_19675 | | succinate dehydrogenase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4932 | | agmatine deiminase | 0.50 | Psyr_2005 | | succinate dehydrogenase subunit C | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4932 | | agmatine deiminase | 0.50 | Psyr_2005 | | succinate dehydrogenase subunit C | — | — |
Pseudomonas stutzeri RCH2 | 0.53 | Psest_4291 | | agmatine deiminase | 0.47 | Psest_2498 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS08825 | | agmatine deiminase | 0.26 | AZOBR_RS13965 | | succinate dehydrogenase | — | — |
Azospirillum sp. SherDot2 | 0.36 | MPMX19_04878 | | Agmatine deiminase | 0.25 | MPMX19_02411 | | Succinate dehydrogenase cytochrome b556 subunit | — | — |
Kangiella aquimarina DSM 16071 | 0.30 | B158DRAFT_1812 | | Peptidylarginine deiminase and related enzymes | 0.45 | B158DRAFT_1420 | | succinate dehydrogenase subunit C (EC 1.3.5.1) | — | — |
Variovorax sp. SCN45 | 0.24 | GFF37 | | Similar to Agmatine deiminase | 0.24 | GFF3899 | | Succinate dehydrogenase cytochrome b-556 subunit | — | — |
Lysobacter sp. OAE881 | 0.23 | ABIE51_RS09325 | | agmatine deiminase family protein | 0.23 | ABIE51_RS12530 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.23 | ABZR86_RS02780 | | agmatine/peptidylarginine deiminase | 0.21 | ABZR86_RS06345 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Rhodanobacter sp. FW510-T8 | 0.23 | OKGIIK_06975 | | Agmatine deiminase | 0.22 | OKGIIK_08490 | sdhC | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Rhodanobacter denitrificans MT42 | 0.22 | LRK55_RS00025 | | agmatine deiminase family protein | 0.23 | LRK55_RS15915 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.22 | LRK54_RS00335 | | agmatine deiminase family protein | 0.23 | LRK54_RS16165 | | succinate dehydrogenase, cytochrome b556 subunit | — | — |
Marinobacter adhaerens HP15 | 0.21 | HP15_2073 | | peptidyl-arginine deiminase family protein | 0.53 | HP15_1517 | | succinate dehydrogenase, cytochrome b560 subunit | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.20 | Xcc-8004.2375.1 | | Agmatine deiminase (EC 3.5.3.12) | 0.19 | Xcc-8004.2455.1 | | Succinate dehydrogenase cytochrome b-556 subunit | — | — |
Alteromonas macleodii MIT1002 | 0.19 | MIT1002_03760 | | Putative agmatine deiminase | 0.47 | MIT1002_01944 | | Succinate dehydrogenase cytochrome b556 subunit | — | — |
Serratia liquefaciens MT49 | 0.19 | IAI46_12735 | | agmatine deiminase family protein | 0.77 | IAI46_06255 | | succinate dehydrogenase cytochrome b556 subunit | low | > 86 |
Phaeobacter inhibens DSM 17395 | 0.18 | PGA1_c26490 | | putative agmatine deiminase | 0.22 | PGA1_c03740 | | succinate dehydrogenase cytochrome b556 subunit | — | — |
Not shown: 19 genomes with orthologs for HER17_RS00785 only; 39 genomes with orthologs for HER17_RS14950 only