Conservation of cofitness between HER17_RS00785 and HER17_RS14950 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00785 agmatine deiminase 1.0 HER17_RS14950 succinate dehydrogenase cytochrome b556 subunit 0.61 14
Dickeya dadantii 3937 0.82 DDA3937_RS00855 agmatine deiminase 0.83 DDA3937_RS06440 succinate dehydrogenase cytochrome b556 subunit low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS20520 agmatine deiminase 0.83 HGI48_RS06480 succinate dehydrogenase cytochrome b556 subunit low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS21565 agmatine deiminase 0.80 DZA65_RS06825 succinate dehydrogenase cytochrome b556 subunit low > 75
Shewanella amazonensis SB2B 0.69 Sama_2521 agmatine deiminase (RefSeq) 0.58 Sama_1423 succinate dehydrogenase, cytochrome b556 subunit (RefSeq)
Shewanella sp. ANA-3 0.68 Shewana3_3465 agmatine deiminase (RefSeq) 0.62 Shewana3_1706 succinate dehydrogenase subunit C (RefSeq)
Shewanella oneidensis MR-1 0.68 SO_0887 agmatine deiminase (RefSeq) 0.60 SO1927 sdhC succinate dehydrogenase, cytochrome b556 subunit (NCBI ptt file)
Rahnella sp. WP5 0.67 EX31_RS21180 agmatine deiminase 0.75 EX31_RS23420 succinate dehydrogenase cytochrome b556 subunit low > 89
Pseudomonas sp. RS175 0.55 PFR28_04897 Agmatine deiminase 0.51 PFR28_03100 Succinate dehydrogenase cytochrome b556 subunit
Pseudomonas putida KT2440 0.55 PP_0266 Agmatine deiminase 0.50 PP_4193 succinate dehydrogenase membrane b-556 subunit
Pseudomonas simiae WCS417 0.55 PS417_01340 agmatine deiminase 0.50 PS417_08875 succinate dehydrogenase
Pseudomonas fluorescens SBW25 0.55 PFLU_RS01435 agmatine deiminase 0.49 PFLU_RS08935 succinate dehydrogenase, cytochrome b556 subunit
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS01435 agmatine deiminase 0.49 PFLU_RS08935 succinate dehydrogenase, cytochrome b556 subunit
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) 0.51 AO356_19675 succinate dehydrogenase
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_4932 agmatine deiminase 0.50 Psyr_2005 succinate dehydrogenase subunit C
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_4932 agmatine deiminase 0.50 Psyr_2005 succinate dehydrogenase subunit C
Pseudomonas stutzeri RCH2 0.53 Psest_4291 agmatine deiminase 0.47 Psest_2498 succinate dehydrogenase, cytochrome b556 subunit
Azospirillum brasilense Sp245 0.37 AZOBR_RS08825 agmatine deiminase 0.26 AZOBR_RS13965 succinate dehydrogenase
Azospirillum sp. SherDot2 0.36 MPMX19_04878 Agmatine deiminase 0.25 MPMX19_02411 Succinate dehydrogenase cytochrome b556 subunit
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_1812 Peptidylarginine deiminase and related enzymes 0.45 B158DRAFT_1420 succinate dehydrogenase subunit C (EC 1.3.5.1)
Variovorax sp. SCN45 0.24 GFF37 Similar to Agmatine deiminase 0.24 GFF3899 Succinate dehydrogenase cytochrome b-556 subunit
Lysobacter sp. OAE881 0.23 ABIE51_RS09325 agmatine deiminase family protein 0.23 ABIE51_RS12530 succinate dehydrogenase, cytochrome b556 subunit
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS02780 agmatine/peptidylarginine deiminase 0.21 ABZR86_RS06345 succinate dehydrogenase, cytochrome b556 subunit
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_06975 Agmatine deiminase 0.22 OKGIIK_08490 sdhC succinate dehydrogenase, cytochrome b556 subunit
Rhodanobacter denitrificans MT42 0.22 LRK55_RS00025 agmatine deiminase family protein 0.23 LRK55_RS15915 succinate dehydrogenase, cytochrome b556 subunit
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS00335 agmatine deiminase family protein 0.23 LRK54_RS16165 succinate dehydrogenase, cytochrome b556 subunit
Marinobacter adhaerens HP15 0.21 HP15_2073 peptidyl-arginine deiminase family protein 0.53 HP15_1517 succinate dehydrogenase, cytochrome b560 subunit
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) 0.19 Xcc-8004.2455.1 Succinate dehydrogenase cytochrome b-556 subunit
Alteromonas macleodii MIT1002 0.19 MIT1002_03760 Putative agmatine deiminase 0.47 MIT1002_01944 Succinate dehydrogenase cytochrome b556 subunit
Serratia liquefaciens MT49 0.19 IAI46_12735 agmatine deiminase family protein 0.77 IAI46_06255 succinate dehydrogenase cytochrome b556 subunit low > 86
Phaeobacter inhibens DSM 17395 0.18 PGA1_c26490 putative agmatine deiminase 0.22 PGA1_c03740 succinate dehydrogenase cytochrome b556 subunit

Not shown: 19 genomes with orthologs for HER17_RS00785 only; 39 genomes with orthologs for HER17_RS14950 only