| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS10320 | | flavin reductase | 1.0 | HER17_RS12840 | | LysR family transcriptional regulator | 0.68 | 6 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_09030 | | pyrimidine utilization flavin reductase protein F | 0.82 | IAI46_17215 | | LysR family transcriptional regulator | low | > 86 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_01694 | | FMN reductase (NADH) RutF | 0.78 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | low | > 85 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_1919 | | pyrimidine utilization flavin reductase protein F | 0.79 | EX28DRAFT_0399 | | Transcriptional regulator | low | > 76 |
| Escherichia coli BW25113 | 0.53 | b1007 | b1007 | orf, hypothetical protein (VIMSS) | 0.79 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.53 | ECD_01010 | | flavin:NADH reductase | 0.79 | ECD_02086 | | putative DNA-binding transcriptional regulator | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_02659 | | FMN reductase (NADH) RutF | 0.79 | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | 0.29 | 24 |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS26450 | | NADH-dependent FMN reductase RutF | 0.79 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | — | — |
| Escherichia coli ECRC62 | 0.53 | BNILDI_19705 | rutF | malonic semialdehyde reductase | 0.79 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | low | > 75 |
| Escherichia fergusonii Becca | 0.53 | EFB2_03073 | | FMN reductase (NADH) RutF | 0.71 | EFB2_01699 | | HTH-type transcriptional regulator CysL | low | > 86 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_23105 | rutF | malonic semialdehyde reductase | 0.79 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | — | — |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_23500 | rutF | malonic semialdehyde reductase | 0.79 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | low | > 87 |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_21540 | rutF | malonic semialdehyde reductase | 0.71 | NOLOHH_15070 | yieE | DNA-binding transcriptional regulator YeiE | low | > 75 |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_08250 | rutF | malonic semialdehyde reductase | 0.79 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | low | > 86 |
| Escherichia coli ECRC100 | 0.53 | OKFHMN_04640 | rutF | pyrimidine utilization flavin reductase protein F | 0.79 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | low | > 80 |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_23695 | rutF | pyrimidine utilization flavin reductase protein F | 0.79 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | — | — |
| Escherichia coli ECRC101 | 0.53 | MCAODC_24025 | rutF | pyrimidine utilization flavin reductase protein F | 0.79 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | low | > 87 |
| Pantoea sp. MT58 | 0.52 | IAI47_12530 | | pyrimidine utilization flavin reductase protein F | 0.75 | IAI47_06680 | | LysR family transcriptional regulator | low | > 76 |
| Variovorax sp. SCN45 | 0.52 | GFF3714 | | FMN reductase (NADH) RutF (EC 1.5.1.42) | 0.42 | GFF3160 | | Transcriptional regulator YeiE, LysR family | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_0995 | | Flavin reductase-like protein | 0.46 | Psyr_3312 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_0995 | | Flavin reductase-like protein | 0.46 | Psyr_3312 | | transcriptional regulator, LysR family | low | > 86 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS10755 | | pyrimidine utilization flavin reductase protein F | 0.78 | BWI76_RS19690 | | LysR family transcriptional regulator | low | > 92 |
| Agrobacterium fabrum C58 | 0.48 | Atu2495 | | flavoprotein oxidoreductase | 0.24 | Atu0672 | | transcriptional regulator, LysR family | low | > 89 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS25005 | | FMN reductase | 0.24 | BPHYT_RS29890 | | LysR family transcriptional regulator | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS07445 | | FMN reductase | 0.44 | HSERO_RS21575 | | transcriptional regulator | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS07485 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component | 0.24 | QEN71_RS34015 | | LysR family transcriptional regulator | low | > 153 |
| Pseudomonas fluorescens GW456-L13 | 0.37 | PfGW456L13_3748 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) | 0.41 | PfGW456L13_4660 | | LysR family transcriptional regulator PA3398 | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.36 | GFF3275 | | 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) | 0.80 | GFF3777 | | LysR family transcriptional regulator YeiE | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.36 | H281DRAFT_01660 | | 4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.14.13.3) | 0.24 | H281DRAFT_03013 | | transcriptional regulator, LysR family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.32 | ABIE53_004540 | | flavin reductase (NADH) | 0.24 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | low | > 113 |
| Rhizobium sp. OAE497 | 0.31 | ABIE40_RS10095 | | flavin reductase | 0.24 | ABIE40_RS15535 | | LysR family transcriptional regulator | — | — |
| Sinorhizobium meliloti 1021 | 0.29 | SMc00514 | | monooxygenase | 0.19 | SM_b20203 | | transcriptional regulator | — | — |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_013510 | | flavin reductase family protein | 0.27 | TX73_009100 | | LysR family transcriptional regulator | low | > 86 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_02021 | | FMN reductase (NADH) RutF | 0.44 | PFR28_00480 | | HTH-type transcriptional activator CmpR | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.23 | RR42_RS31995 | | flavin reductase | 0.45 | RR42_RS13965 | | LysR family transcriptional regulator | low | > 128 |
| Pseudomonas simiae WCS417 | 0.21 | PS417_17920 | | nitrilotriacetate monooxygenase | 0.43 | PS417_05850 | | LysR family transcriptional regulator | low | > 88 |
| Azospirillum brasilense Sp245 | 0.21 | AZOBR_RS20045 | | flavin reductase | 0.25 | AZOBR_RS32560 | | LysR family transcriptional regulator | low | > 97 |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A1841 | | Flavin reductase-like, FMN-binding (NCBI) | 0.23 | Rru_A2401 | | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | low | > 58 |
| Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS06740 | | flavin reductase family protein | 0.34 | ABCV34_RS05920 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Dechlorosoma suillum PS | 0.19 | Dsui_1004 | | conserved protein of DIM6/NTAB family | 0.40 | Dsui_2257 | | transcriptional regulator | low | > 51 |
Not shown: 6 genomes with orthologs for HER17_RS10320 only; 51 genomes with orthologs for HER17_RS12840 only