Conservation of cofitness between HER17_RS05050 and HER17_RS11690 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05050 recombination regulator RecX 1.0 HER17_RS11690 carboxy terminal-processing peptidase 0.68 19
Dickeya dianthicola ME23 0.57 DZA65_RS17445 recombination regulator RecX 0.84 DZA65_RS12505 carboxy terminal-processing peptidase low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16350 recombination regulator RecX 0.84 HGI48_RS12055 carboxy terminal-processing peptidase low > 71
Dickeya dadantii 3937 0.56 DDA3937_RS16240 recombination regulator RecX 0.85 DDA3937_RS11965 carboxy terminal-processing peptidase low > 74
Serratia liquefaciens MT49 0.54 IAI46_03845 recombination regulator RecX 0.83 IAI46_10800 carboxy terminal-processing peptidase low > 86
Rahnella sp. WP5 0.49 EX31_RS07795 recombination regulator RecX 0.77 EX31_RS24880 carboxy terminal-processing peptidase low > 89
Escherichia coli BW25113 0.47 b2698 recX RecA regulator RecX (NCBI) 0.82 b1830 prc carboxy-terminal protease for penicillin-binding protein 3 (NCBI) low > 76
Escherichia coli ECRC100 0.47 OKFHMN_20710 recX recombination regulator RecX 0.81 OKFHMN_26465 prc carboxy terminal-processing peptidase low > 80
Escherichia coli ECRC98 0.47 JDDGAC_24375 recX recombination regulator RecX 0.81 JDDGAC_01040 prc carboxy terminal-processing peptidase low > 86
Escherichia coli ECRC101 0.47 MCAODC_11235 recX recombination regulator RecX 0.81 MCAODC_18940 prc carboxy terminal-processing peptidase low > 87
Escherichia coli ECRC99 0.47 KEDOAH_07425 recX recombination regulator RecX 0.81 KEDOAH_01640 prc carboxy terminal-processing peptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01036 Regulatory protein RecX 0.81 OHPLBJKB_01901 Tail-specific protease low > 73
Escherichia coli BL21 0.47 ECD_02548 regulatory protein for RecA 0.81 ECD_01801 carboxy-terminal protease for penicillin-binding protein 3 low > 61
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15055 recombination regulator RecX 0.82 ECOLIN_RS10190 carboxy terminal-processing peptidase — —
Escherichia coli ECOR27 0.47 NOLOHH_12550 recX recombination regulator RecX 0.81 NOLOHH_16975 prc carboxy terminal-processing peptidase low > 75
Escherichia coli ECRC102 0.47 NIAGMN_18480 recX recombination regulator RecX 0.81 NIAGMN_01595 prc carboxy terminal-processing peptidase — —
Escherichia coli ECOR38 0.47 HEPCGN_19905 recX recombination regulator RecX 0.81 HEPCGN_04865 prc carboxy terminal-processing peptidase low > 87
Escherichia coli ECRC62 0.47 BNILDI_11110 recX recombination regulator RecX 0.81 BNILDI_15770 prc carboxy terminal-processing peptidase low > 75
Enterobacter sp. TBS_079 0.47 MPMX20_03579 Regulatory protein RecX 0.80 MPMX20_02737 Tail-specific protease low > 85
Escherichia fergusonii Becca 0.47 EFB2_01226 Regulatory protein RecX 0.81 EFB2_02171 Tail-specific protease low > 86
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria 0.80 EX28DRAFT_0726 C-terminal peptidase (prc) low > 76
Pantoea sp. MT58 0.45 IAI47_04305 regulatory protein RecX 0.82 IAI47_08705 carboxy terminal-processing peptidase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4692 Regulatory protein RecX 0.81 GFF2845 Tail-specific protease precursor (EC 3.4.21.102) low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS22175 recombination regulator RecX 0.82 BWI76_RS17975 tail-specific protease — —
Erwinia tracheiphila SCR3 0.40 LU632_RS15730 recombination regulator RecX 0.81 LU632_RS13250 prc carboxy terminal-processing peptidase — —
Pseudomonas sp. S08-1 0.26 OH686_18210 Regulatory protein RecX 0.36 OH686_19710 Tail-specific protease precursor low > 80
Shewanella loihica PV-4 0.25 Shew_1216 regulatory protein RecX (RefSeq) 0.51 Shew_1802 carboxy-terminal protease (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.24 CSW01_02880 regulatory protein RecX 0.57 CSW01_07515 tail-specific protease low > 62
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4667 Regulatory protein RecX 0.36 PfGW456L13_4207 Periplasmic protease low > 87
Pseudomonas simiae WCS417 0.24 PS417_05820 recombinase RecX 0.36 PS417_09325 peptidase S41 low > 88
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS05890 recombination regulator RecX 0.36 PFLU_RS09980 peptidase S41 low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS05890 recombination regulator RecX 0.36 PFLU_RS09980 peptidase S41 — —
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_05665 recombinase RecX 0.36 AO356_19335 peptidase S41 — —
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3144 Regulatory protein RecX 0.37 Pf1N1B4_3741 Periplasmic protease — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16810 recombinase RecX 0.36 AO353_02440 peptidase S41 low > 101
Pseudomonas sp. RS175 0.23 PFR28_00473 Regulatory protein RecX 0.36 PFR28_03169 Tail-specific protease 0.28 6
Pseudomonas stutzeri RCH2 0.23 Psest_2871 Uncharacterized protein conserved in bacteria 0.36 Psest_2951 C-terminal peptidase (prc) — —
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_1532 Uncharacterized protein conserved in bacteria 0.36 B158DRAFT_1732 C-terminal peptidase (prc) low > 40
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2992 Regulatory protein RecX 0.36 Pf6N2E2_5780 Periplasmic protease low > 103
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1379 Regulatory protein RecX 0.35 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1379 Regulatory protein RecX 0.35 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A — —
Pseudomonas putida KT2440 0.22 PP_1630 Regulatory protein RecX 0.36 PP_1719 Tail-specific protease prc low > 96
Shewanella amazonensis SB2B 0.21 Sama_1047 hypothetical protein (RefSeq) 0.52 Sama_1585 carboxy-terminal protease (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.21 MPMX26_01307 Regulatory protein RecX 0.27 MPMX26_00421 Tail-specific protease low > 36
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3108.1 Regulatory protein RecX 0.34 Xcc-8004.914.1 tail-specific protease low > 74

Not shown: 8 genomes with orthologs for HER17_RS05050 only; 12 genomes with orthologs for HER17_RS11690 only