Conservation of cofitness between HER17_RS11650 and HER17_RS08125 in Pectobacterium carotovorum WPP14

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11650 cupin domain-containing protein 1.0 HER17_RS08125 chemotaxis response regulator CheY 0.71 4
Serratia liquefaciens MT49 0.84 IAI46_10385 cupin domain-containing protein 0.96 IAI46_16010 chemotaxis response regulator CheY low > 86
Dickeya dianthicola ME23 0.83 DZA65_RS11890 cupin domain-containing protein 0.97 DZA65_RS14050 chemotaxis protein CheY low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS11555 cupin domain-containing protein 0.97 HGI48_RS13565 chemotaxis response regulator CheY low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS11510 cupin domain-containing protein 0.97 DDA3937_RS13520 chemotaxis response regulator CheY low > 74
Enterobacter asburiae PDN3 0.82 EX28DRAFT_1802 Uncharacterized conserved protein 0.92 EX28DRAFT_0674 Response regulator receiver domain low > 76
Rahnella sp. WP5 0.81 EX31_RS24550 cupin domain-containing protein 0.91 EX31_RS11355 chemotaxis protein CheY low > 89
Enterobacter sp. TBS_079 0.80 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.92 MPMX20_02786 Chemotaxis protein CheY low > 85
Escherichia coli BW25113 0.80 b1128 ycfD orf, hypothetical protein (VIMSS) 0.94 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) low > 76
Escherichia coli ECRC62 0.80 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 BNILDI_15385 cheY chemotaxis regulatory protein CheY low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF3413 FIG002776: hypothetical protein 0.93 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 78
Escherichia coli ECOR38 0.80 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.93 HEPCGN_04575 cheY chemotaxis regulatory protein CheY low > 87
Escherichia fergusonii Becca 0.80 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.93 EFB2_02061 Chemotaxis protein CheY low > 86
Escherichia coli ECRC99 0.80 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 KEDOAH_01950 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECOR27 0.80 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 NOLOHH_16595 cheY chemotaxis regulatory protein CheY low > 75
Escherichia coli ECRC98 0.80 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 JDDGAC_00730 cheY chemotaxis regulatory protein CheY — —
Escherichia coli BL21 0.80 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 0.94 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.94 OHPLBJKB_01846 Chemotaxis protein CheY low > 73
Escherichia coli Nissle 1917 0.80 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.93 ECOLIN_RS10750 chemotaxis response regulator CheY — —
Escherichia coli ECRC100 0.80 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 OKFHMN_26155 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECRC102 0.80 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 NIAGMN_01905 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECRC101 0.80 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.94 MCAODC_19250 cheY chemotaxis regulatory protein CheY — —
Erwinia tracheiphila SCR3 0.79 LU632_RS14600 cupin domain-containing protein 0.91 LU632_RS13520 cheY chemotaxis response regulator CheY low > 74
Pantoea sp. MT58 0.76 IAI47_11940 cupin domain-containing protein 0.93 IAI47_08335 chemotaxis response regulator CheY low > 76
Shewanella oneidensis MR-1 0.43 SO2636 conserved hypothetical protein (NCBI ptt file) 0.73 SO3209 cheY-3 chemotaxis protein CheY (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.73 Shewana3_1360 response regulator receiver protein (RefSeq) — —
Shewanella loihica PV-4 0.41 Shew_1557 cupin 4 family protein (RefSeq) 0.74 Shew_1384 response regulator receiver protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2065 cupin 4 (RefSeq) 0.73 Sama_2279 response regulator receiver protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.34 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.73 MIT1002_01104 Chemotaxis protein CheY 0.41 13
Marinobacter adhaerens HP15 0.31 HP15_2089 cupin 4 family protein 0.69 HP15_2301 response regulator receiver domain protein (CheY-) — —
Paraburkholderia graminis OAS925 0.27 ABIE53_002722 50S ribosomal protein L16 3-hydroxylase 0.78 ABIE53_000118 two-component system chemotaxis response regulator CheY low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00534 50S ribosomal protein L16 3-hydroxylase 0.78 H281DRAFT_05748 response regulator receiver protein low > 103
Castellaniella sp019104865 MT123 0.25 ABCV34_RS00265 cupin domain-containing protein 0.80 ABCV34_RS05810 chemotaxis response regulator CheY low > 48
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS12490 cupin 0.77 BPHYT_RS18965 chemotaxis protein CheY low > 109
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS06070 cupin domain-containing protein 0.80 QEN71_RS28980 chemotaxis response regulator CheY 0.76 85
Ralstonia solanacearum GMI1000 0.24 RS_RS05720 cupin domain-containing protein 0.78 RS_RS23890 chemotaxis protein CheY — —
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18455 cupin domain-containing protein 0.78 RPSI07_RS06225 chemotaxis protein CheY low > 81
Ralstonia solanacearum UW163 0.24 UW163_RS12375 cupin domain-containing protein 0.77 UW163_RS21730 chemotaxis protein CheY — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS14905 cupin domain-containing protein 0.77 RALBFv3_RS17420 chemotaxis protein CheY — —
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS06270 cupin 0.80 RR42_RS35780 chemotaxis protein CheY low > 128
Variovorax sp. SCN45 0.22 GFF2745 FIG074102: hypothetical protein 0.78 GFF5768 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY — —

Not shown: 2 genomes with orthologs for HER17_RS11650 only; 43 genomes with orthologs for HER17_RS08125 only